README.md

In cttedwards/bdm: Bayesian biomass dynamics model

bdm

Bayesian biomass dynamic model for estimation of population status from catch and abundance data

Instructions

First, install the 'rstan' and 'devtools' packages from CRAN:

# Install packages
install.packages("devtools")
install.packages("rstan")

Then install 'bdm' directly from GitHub:

# devtools command to get bdm from GitHub
devtools::install_github("cttedwards/bdm")

The life history module 'lhm' is required to estimate the intrinsic growth rate:

# devtools command to get lhm from GitHub
devtools::install_github("cttedwards/lhm")

cttedwards/bdm documentation built on Oct. 11, 2022, 7:52 p.m.