knitr::opts_chunk$set(collapse = TRUE, comment = "#>")

read_fasta()/write_fasta() can read/write FASTA format file into/from named character. If you feel frustrate with DNAbin or other stophisticated class, and find youself using read/write_line and str_extract/replace/... repeatedly, may be you can consider this package.

fasta_to_nexus() transform that named vector to nexus format.

dongzhuoer/biozhuoer documentation built on May 13, 2019, 11:56 p.m.