API for egeulgen/pathfindR
Pathway Enrichment Analysis Utilizing Active Subnetworks

Global functions
RA_clustered Man page
RA_exp_mat Man page
RA_input Man page
RA_output Man page
active_snw_search Man page Source code
annotate_pathway_DEGs Man page Source code
biocarta_genes Man page
biocarta_pathways Man page
calculate_pw_scores Man page Source code
cluster_graph_vis Man page Source code
cluster_pathways Man page Source code
create_kappa_matrix Man page Source code
custom_result Man page
enrichment Man page Source code
enrichment_analyses Man page Source code
enrichment_chart Man page Source code
example_active_snws Man page
filterActiveSnws Man page Source code
fuzzy_pw_clustering Man page Source code
go_all_genes Man page
go_all_pathways Man page
go_bp_genes Man page
go_bp_pathways Man page
go_cc_genes Man page
go_cc_pathways Man page
go_mf_genes Man page
go_mf_pathways Man page
hierarchical_pw_clustering Man page Source code
hyperg_test Man page Source code
input_processing Man page Source code
input_testing Man page Source code
kegg_genes Man page
kegg_pathways Man page
onAttach Source code
pathfindR Man page
pathfindR-package Man page
plot_scores Man page Source code
reactome_genes Man page
reactome_pathways Man page
return_pin_path Man page Source code
run_pathfindR Man page Source code
summarize_enrichment_results Man page Source code
visualize_hsa_KEGG Man page Source code
visualize_pw_interactions Man page Source code
visualize_pws Man page Source code
egeulgen/pathfindR documentation built on Nov. 28, 2018, 3:07 p.m.