In elong0527/MINT: Nonparametric Microbial Interdependence Test (NMIT)

knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>"
)

library(NMIT)
library(dplyr)

data(mice)

otu <- mice %>% select(starts_with("OTU")) %>% as.data.frame()
id.var <- mice$id
cov.var <- mice$group
time.var <- mice$time

NMIT(otu, id.var, cov.var, time.var, method = "kendall", dist.type = "F")

elong0527/MINT documentation built on May 23, 2020, 9:12 p.m.