Man pages for enriquea/cnveR
cnveR: Copy Number Variation exploring in R

buildGRangesFromDatabuildGRangesFromData
buildIGraphObjectFromGrangesbuildIGraphObjectFromGranges
clusteringGRangesclusteringGRanges
cnvTypeConvertercnvTypeConverter
compute.bonferronicompute.bonferroni
compute.fdrcompute.fdr
computeOverlapFrequencycomputeOverlapFrequency
compute.p.valuecompute.p.value
convertDataToManhattanconvertDataToManhattan
convertGRangeToDataFrameconvertGRangeToDataFrame
convertKaryotypeToDataFrameconvertKaryotypeToDataFrame
convertMergedOverlapToGrangesconvertMergedOverlapToGranges
exportIGraphToGexfObjectexportIGraphToGexfObject
extractClustersFromSelfHitsextractClustersFromSelfHits
filterGRangesByChromosomefilterGRangesByChromosome
filterGRangesByMetaColumnfilterGRangesByMetaColumn
filterGRangesByOverlappingfilterGRangesByOverlapping
filterGRangesByPercentOverlapfilterGRangesByPercentOverlap
filterGRangesBySizefilterGRangesBySize
getMetaInformationgetMetaInformation
getOverlapsgetOverlaps
mapVectormapVector
mergeCNVfilesmergeCNVfiles
mergeConnectedRangesmergeConnectedRanges
multiplotmultiplot
parseGTFFileparseGTFFile
parseKaryotypeFormatparseKaryotypeFormat
plotDensityplotDensity
plotGRangesClusterByOverlapplotGRangesClusterByOverlap
plotHistFreqplotHistFreq
plotQQplotQQ
plotRawCorrelationplotRawCorrelation
plotVenn2SetplotVenn2Set
printFilterMessageprintFilterMessage
readSQliteFilereadSQliteFile
removeNAsremoveNAs
rmsermse
writeBEDfileswriteBEDfiles
writeSQliteFilewriteSQliteFile
enriquea/cnveR documentation built on May 13, 2017, 6:09 p.m.