Man pages for epiforecasts/WuhanSeedingVsTransmission
The transmissibility of novel Coronavirus in the early stages of the 2019-20 outbreak in Wuhan
| condition_and_report_on_cases | Condition on cases and return accepted sample size by... |
| condition_on_known | Condition on known cases |
| fitted_delay_sample_func | Fitted delay sampling function |
| get_linelist | Get the latest compiled linelist |
| get_rep_sample_fun | Get a sampling function for reporting delays |
| make_duration_size_table | Make seeding event duration vs event size table |
| pipe | Pipe operator |
| plot_per_accepted_tile | Plot a heat map of accepted samples by scenario |
| plot_R0_density | Plot density plots of the basic reproduction number |
| proportion_allowed_by_condition | Proportion of samples per scenario allowed by condition |
| restrict_by_condition | Restrict scenarios based on allowed scenarios |
| rgamma_with_mean_sd | Mean and standard deviation parameterised gamma sampling... |
| run_scenario_grid | Run the scenario analysis grid. |
| run_sim | Negative binomial branching process model |
| rweibull_with_mean_sd | Mean and standard deviation parameterised Weibull sampling... |
| scenario_analysis | Run a scenario analyis |
| summarise_end_r0 | Summarise R0 estimates across samples |
| WuhanSeedingVsTransmission-package | WuhanSeedingVsTransmission: The transmissibility of novel... |
