evanbiederstedt/FusionVizR: Visualize Fusions in RNA-seq Data Against WGS Breakpoints
Version 0.0.0.9000

FusionVizR is a visualization package designed to show the parts of transcripts fused together (versus fused out) in RNA fusion events. Given a set of genomic fusion breakpoints, FusionViz will annotate these with where they fall within annotated transcripts. This includes the relation of breakpoints to annotated protein domains. The FusionViz output allows quick discovery of fusions where exons with oncogenic protein domains are fused in, or those with tumor suppressor protein domains are fused out.

Getting started

Package details

Maintainer
LicenseWhat license is it under?
Version0.0.0.9000
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("evanbiederstedt/FusionVizR")
evanbiederstedt/FusionVizR documentation built on Feb. 6, 2018, 4:09 p.m.