R/CCCPackage.R

In ewouddt/CCCBiclust: R Wrapper for Java Implementation of CCC and e-CC biclustering algorithm

#' Identification of Regulatory Modules in Time Series Gene Expression Data through CCC and e-CCC biclustering algorithm.
#'
#' CCCBiclust is an R wrapper for the available Java code for the CCC and e-CCC algorithm available at \url{http://kdbio.inesc-id.pt/software/ccc-biclustering/} and \url{http://kdbio.inesc-id.pt/software/e-ccc-biclustering/}
#'  
#' @references Sara C. Madeira, Miguel C. Teixeira, Isabel Sa Correia and Arlindo L. Oliveira, "Identification of Regulatory Modules in Time Series Gene Expression Data using a Linear Time Biclustering Algorithms", \emph{IEEE/ACM Transactions on Computational Biology and Bioinformatics}
#' @references Sara C. Madeira and Arlindo L. Oliveira, "A polynomial time biclustering algorithm for finding genes with approximate expression patterns in gene expression time series", \emph{Algorithms for Molecular Biology 2009}, 4:8 (4 June 2009).
#'
#' @docType package
#' @name CCCBiclust
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