tests/testthat/test_sum.R

In gdemin/labelr: Tables, Labels and Some Useful Functions from Spreadsheets and 'SPSS' Statistics

context("common case")

a = 1:3
b = 3:1
d = NA
data(iris)

expect_equal(sum_row(a, b, d), c(4,4,4))
expect_equal(sum_col(a, b, d), c(6, 6, 0))
expect_equal(sum_col(iris[,-5], iris[,-c(1,5)]), c(colSums(iris[,-5]), colSums(iris[,-c(1,5)])))

expect_equal(sum_col(x1 = a, x2 = b, x3= d), c(x1 = 6, x2 = 6, x3 = 0))
expect_equal(sum_col(x1 = a, x2 = b, d), c(x1 = 6, x2 = 6, 0))

data(iris)
expect_equal(mean(iris[,-5]), mean(unlist(iris[,-5])))
expect_equal(mean_row(a, b, d), c(2,2,2))
expect_equal(mean_col(a, b, d), c(2, 2, NA))

expect_equal(median_row(a, b, d), c(2,2,2))
expect_equal(median_col(a, b, d), c(2, 2, NA))

expect_equal(max_row(a, b, d), c(3,2,3))
expect_equal(max_col(a, b, d), c(3, 3, NA))

expect_equal(min_row(a, b, d), c(1,2,1))
expect_equal(min_col(a, b, d), c(1, 1, NA))

#######
expect_equal(max_row(iris[,-5]), apply(iris[,-5], 1, max))
expect_equal(max_col(iris[,-5]), apply(iris[,-5], 2, max))

expect_equal(min_row(iris[,-5]), apply(iris[,-5], 1, min))
expect_equal(min_col(iris[,-5]), apply(iris[,-5], 2, min))

temp = cbind(a, b, NA)
expect_equal(sd_row(a, b, d), apply(temp, 1, sd, na.rm = TRUE))
expect_equal(unname(sd_col(a, b, d)), unname(apply(temp, 2, sd)))

expect_equal(apply_row(sum, a, b, d), 1*c(NA,NA,NA))
expect_equal(unname(apply_col(sum, a, b, d)), c(6,6,NA))

context("edge cases")

a = 1:3
b = 3:1
d = numeric(0)

expect_equal(sum_row(a, b, d), c(4,4,4))
expect_equal(unname(sum_col(a, b, d)), c(6,6))


expect_equal(mean_row(a, b, d), c(2,2,2))
expect_equal(unname(mean_col(a, b, d)), c(2,2))

expect_equal(median_row(a, b, d), c(2,2,2))
expect_equal(unname(median_col(a, b, d)), c(2,2))

expect_equal(max_row(a, b, d), c(3,2,3))
expect_equal(unname(max_col(a, b, d)), c(3,3))

expect_equal(min_row(a, b, d), c(1,2,1))
expect_equal(unname(min_col(a, b, d)), c(1,1))

temp = cbind(a, b, NA)
expect_equal(sd_row(a, b, d), apply(temp, 1, sd, na.rm = TRUE))
expect_equal(sd_row(temp, na.rm = FALSE), apply(temp, 1, sd, na.rm = FALSE))
expect_equal(unname(sd_col(temp, na.rm = FALSE)), unname(apply(temp, 2, sd, na.rm = FALSE)))

expect_equal(apply_row(sum, a, b, d), c(4,4, 4))
expect_equal(unname(apply_col(sum, a, b, d)), c(6,6))

new_median = with(iris, median_row(Sepal.Length, Sepal.Width, Petal.Length, Petal.Width))
new_mean = with(iris, mean_row(Sepal.Length, Sepal.Width, Petal.Length, Petal.Width))

expect_equal(new_median, apply(iris[,-5], 1, median))
expect_equal(new_mean, apply(iris[,-5], 1, mean))


context("any/all")

a = c(T, NA, F, T, NA, F, T, NA, F)
b = c(T, T, T, F, F, F, NA, NA, NA)

expect_identical(any_in_row(a, b, na.rm = FALSE),
                 c(TRUE,  TRUE,  TRUE,  TRUE, NA, FALSE, TRUE, NA, NA))

expect_identical(any_in_row(data.frame(a, b), na.rm = FALSE),
                 c(TRUE,  TRUE,  TRUE,  TRUE, NA, FALSE, TRUE, NA, NA))

expect_identical(any_in_row(a, b),
                 c(TRUE,  TRUE,  TRUE,  TRUE, FALSE, FALSE, TRUE, FALSE, FALSE))

expect_identical(any_in_row(data.frame(a, b)),
                 c(TRUE,  TRUE,  TRUE,  TRUE, FALSE, FALSE, TRUE, FALSE, FALSE))

expect_identical(any_in_col(rbind(a, b), na.rm = FALSE),
                 c(TRUE,  TRUE,  TRUE,  TRUE, NA, FALSE, TRUE, NA, NA))

expect_identical(any_in_col(rbind(a, b)),
                 c(TRUE,  TRUE,  TRUE,  TRUE, FALSE, FALSE, TRUE, FALSE, FALSE))

expect_identical(any_in_col(a = a, b = b),
                 c(a = TRUE,  b = TRUE))

####
expect_identical(all_in_row(a, b, na.rm = FALSE),
                 c(TRUE, NA, FALSE, FALSE, FALSE, FALSE,    NA,    NA, FALSE))

expect_identical(all_in_row(a, b),
                 c(TRUE, TRUE, FALSE, FALSE, FALSE, FALSE, TRUE, TRUE, FALSE))

expect_identical(all_in_row(data.frame(a, b), na.rm = FALSE),
                 c(TRUE, NA, FALSE, FALSE, FALSE, FALSE,    NA,    NA, FALSE))

expect_identical(all_in_row(data.frame(a, b)),
                 c(TRUE, TRUE, FALSE, FALSE, FALSE, FALSE,    TRUE,    TRUE, FALSE))

expect_identical(all_in_col(rbind(a, b), na.rm = FALSE),
                 c(TRUE, NA, FALSE, FALSE, FALSE, FALSE, NA, NA, FALSE))

expect_identical(all_in_col(a, b),
                 c(FALSE,  FALSE))


expect_identical(all_in_col(sheet(a, b)),
                 c(a = FALSE,  b = FALSE))