Files in gevaertlab/MethylMix
MethylMix: Identifying methylation driven cancer genes
DESCRIPTION
NAMESPACE
NEWS
R/ComBat_NoFiles.R
R/Download_Preprocess.R
R/MethylMix.R
R/dataDoc.R
README.md
data/BatchData.rda
data/GEcancer.rda
data/METcancer.rda
data/METnormal.rda
data/ProbeAnnotation.rda
data/SNPprobes.rda
man/BatchData.Rd
man/ClusterProbes.Rd
man/ComBat_NoFiles.Rd
man/Download_DNAmethylation.Rd
man/Download_GeneExpression.Rd
man/GEcancer.Rd
man/GetData.Rd
man/METcancer.Rd
man/METnormal.Rd
man/MethylMix.Rd
man/MethylMix_MixtureModel.Rd
man/MethylMix_ModelGeneExpression.Rd
man/MethylMix_ModelSingleGene.Rd
man/MethylMix_PlotModel.Rd
man/MethylMix_Predict.Rd
man/MethylMix_RemoveFlipOver.Rd
man/Preprocess_CancerSite_Methylation27k.Rd
man/Preprocess_CancerSite_Methylation450k.Rd
man/Preprocess_DNAmethylation.Rd
man/Preprocess_GeneExpression.Rd
man/Preprocess_MAdata_Cancer.Rd
man/Preprocess_MAdata_Normal.Rd
man/ProbeAnnotation.Rd
man/SNPprobes.Rd
man/TCGA_BatchCorrection_MolecularData.Rd
man/TCGA_GENERIC_BatchCorrection.Rd
man/TCGA_GENERIC_CheckBatchEffect.Rd
man/TCGA_GENERIC_CleanUpSampleNames.Rd
man/TCGA_GENERIC_GetSampleGroups.Rd
man/TCGA_GENERIC_LoadIlluminaMethylationData.Rd
man/TCGA_GENERIC_MET_ClusterProbes_Helper_ClusterGenes_with_hclust.Rd
man/TCGA_GENERIC_MergeData.Rd
man/TCGA_Load_MolecularData.Rd
man/TCGA_Process_EstimateMissingValues.Rd
man/betaEst_2.Rd
man/blc_2.Rd
man/combineForEachOutput.Rd
man/get_firehoseData.Rd
man/predictOneGene.Rd
tests/testthat.R
tests/testthat/test_code.R
vignettes/plot1.png
vignettes/plot2.png
vignettes/plot3.png
vignettes/plot4.png
vignettes/vignettes.Rmd
