Files in giraola/taxxo
Integrating and automatising tools for prokaryotes taxonogenomics
.gitattributes
DESCRIPTION
NAMESPACE
R/aai.R
R/agios.R
R/anib.R
R/anib_new.R
R/aprot.R
R/getOS.R
R/mgene.R
R/prodigal.R
R/rrna.R
R/uprot.R
R/zzz.R
README.md
inst/barrnap/common.zip
inst/blast/darwin/blastdbcmd.zip
inst/blast/darwin/blastn.zip
inst/blast/darwin/blastp.zip
inst/blast/darwin/hs-blastn.zip
inst/blast/darwin/makeblastdb.zip
inst/blast/darwin/tblastx.zip
inst/blast/linux/blastdbcmd.zip
inst/blast/linux/blastn.zip
inst/blast/linux/blastp.zip
inst/blast/linux/hs-blastn.zip
inst/blast/linux/makeblastdb.zip
inst/blast/linux/tblastx.zip
inst/clustalo/darwin/clustalo
inst/clustalo/linux/clustalo
inst/exdata/archaeal/TIGR00491.hmm
inst/exdata/archaeal/TIGR01008.hmm
inst/exdata/archaeal/TIGR01018.hmm
inst/exdata/archaeal/TIGR01020.hmm
inst/exdata/archaeal/TIGR01025.hmm
inst/exdata/archaeal/TIGR01038.hmm
inst/exdata/archaeal/TIGR01046.hmm
inst/exdata/archaeal/TIGR01077.hmm
inst/exdata/archaeal/TIGR01080.hmm
inst/exdata/archaeal/TIGR03626.hmm
inst/exdata/archaeal/TIGR03627.hmm
inst/exdata/archaeal/TIGR03628.hmm
inst/exdata/archaeal/TIGR03629.hmm
inst/exdata/archaeal/TIGR03630.hmm
inst/exdata/archaeal/TIGR03653.hmm
inst/exdata/archaeal/TIGR03665.hmm
inst/exdata/uprot/COG0012.hmm
inst/exdata/uprot/COG0016.hmm
inst/exdata/uprot/COG0018.hmm
inst/exdata/uprot/COG0048.hmm
inst/exdata/uprot/COG0049.hmm
inst/exdata/uprot/COG0052.hmm
inst/exdata/uprot/COG0080.hmm
inst/exdata/uprot/COG0081.hmm
inst/exdata/uprot/COG0085.hmm
inst/exdata/uprot/COG0086.hmm
inst/exdata/uprot/COG0087.hmm
inst/exdata/uprot/COG0088.hmm
inst/exdata/uprot/COG0090.hmm
inst/exdata/uprot/COG0091.hmm
inst/exdata/uprot/COG0092.hmm
inst/exdata/uprot/COG0093.hmm
inst/exdata/uprot/COG0094.hmm
inst/exdata/uprot/COG0096.hmm
inst/exdata/uprot/COG0097.hmm
inst/exdata/uprot/COG0098.hmm
inst/exdata/uprot/COG0099.hmm
inst/exdata/uprot/COG0100.hmm
inst/exdata/uprot/COG0102.hmm
inst/exdata/uprot/COG0103.hmm
inst/exdata/uprot/COG0124.hmm
inst/exdata/uprot/COG0172.hmm
inst/exdata/uprot/COG0184.hmm
inst/exdata/uprot/COG0185.hmm
inst/exdata/uprot/COG0186.hmm
inst/exdata/uprot/COG0197.hmm
inst/exdata/uprot/COG0200.hmm
inst/exdata/uprot/COG0201.hmm
inst/exdata/uprot/COG0202.hmm
inst/exdata/uprot/COG0215.hmm
inst/exdata/uprot/COG0256.hmm
inst/exdata/uprot/COG0495.hmm
inst/exdata/uprot/COG0522.hmm
inst/exdata/uprot/COG0525.hmm
inst/exdata/uprot/COG0533.hmm
inst/exdata/uprot/COG0541.hmm
inst/exdata/uprot/COG0552.hmm
inst/exdata/uprot/tresholds.csv
inst/fasttree/darwin/FastTree
inst/fasttree/linux/FastTree
inst/hmmer3/darwin/hmmbuild
inst/hmmer3/darwin/hmmsearch
inst/hmmer3/linux/hmmbuild
inst/hmmer3/linux/hmmsearch
inst/prodigal/darwin/prodigal
inst/prodigal/linux/prodigal
man/a
man/aai.Rd
man/agios.Rd
man/anib.Rd
man/aprot.Rd
man/prodigal.Rd
man/rrna.Rd
man/uprot.Rd
taxxo.Rproj
userguide.pdf
