API for gschofl/hlatools
A collection of tools to work with IPD-IMGT/HLA data

Global functions
HLAAllele Man page Source code
HLAAllele-class Man page
HLAGene Man page Source code
HLAGene_ Man page
HLARanges Man page Source code
HLARanges-class Man page
HLARangesList Man page Source code
HLARangesList-class Man page
HLARanges_to_string Source code
[,HLAAllele,character,missing-method Man page
[,HLAAllele,logical,missing-method Man page
[,HLAAllele,numeric,missing-method Man page
\%>\% Man page
allele_id Man page
allele_name Man page
allele_table Man page Source code
c,HLAAllele-method Man page
calc_consensus_string Source code
check_IMGTHLA Man page Source code
check_remotes Man page Source code
checkout_db_version Source code
clone_IMGTHLA Man page Source code
collapse Source code
colon Source code
comma Source code
cwd_status Man page
db_version Man page
elementMetadata Man page
elementMetadata<- Man page
end Man page
ethnicity Man page
exon Man page
exon_distance_matrix Source code
expand_hla_allele Source code
features Man page
features<- Man page
fetch_IMGTHLA Source code
g_group Man page
g_table Man page Source code
generate_nmdp_lookup Source code
getFrame Man page
getId Man page
getOrder Man page
getStatus Man page
getType Man page
hasNext Man page Source code
hasNext.iRanges Source code
hasNext.ihasNext Source code
hla_allele_to_genotype Source code
hla_dat_de Source code
hla_dat_ft Source code
hla_dat_id Source code
hla_dat_sq Source code
hla_field1 Man page Source code
hla_field2 Man page Source code
hla_prefix Man page Source code
hla_sort Man page Source code
hlatools Man page
hlatools-package Man page
hlatools_version Man page
ihasNext Man page Source code
intron Man page
is_complete Man page
is_lsl Man page
iter.IRanges Man page Source code
length,HLAAllele-method Man page
length.HLAGene Source code
locusname Man page
locusname<- Man page
make_hla_allele_parser Source code
match_alleles Man page Source code
match_hla_locus Source code
names,HLAAllele-method Man page
names.HLAGene Source code
nmdp_table Man page Source code
normalise_ranges Source code
noutr Man page
onLoad Source code
p_group Man page
parse_hla_alleles Man page Source code
print.allele_tbl Source code
print.g_tbl Source code
print.nmdp_tbl Source code
pull_IMGTHLA Man page Source code
ranges Man page
ranges<- Man page
read_hla_xml Man page Source code
recycle_vector Source code
reexports Man page
sample_name Man page
seqnames Man page
sequences Man page
sequences<- Man page
show_HLAAllele Source code
slash Source code
start Man page
string_to_HLARanges Source code
strsplit1 Source code
strsplitN Source code
update_IMGTHLA Source code
update_hla_xml Man page Source code
utr Man page
valid_hla_loci_ Source code
width Man page
gschofl/hlatools documentation built on Aug. 13, 2018, 1:39 a.m.