API for guldenolgun/NoRCE
NoRCE: Noncoding RNA Sets Cis Annotation and Enrichment
| Global functions | |
|---|---|
| .onLoad | Source code |
| KeggEnrichment | Man page Source code |
| NoRCE-class | Man page |
| WikiEnrichment | Man page Source code |
| WikiPathwayDB | Source code |
| annGO | Man page Source code |
| assembly | Man page Source code |
| brain_disorder_ncRNA | Man page |
| brain_mirna | Man page |
| breastmRNA | Man page |
| calculateCorr | Man page Source code |
| commonGene | Source code |
| commonGeneRegion | Source code |
| convertGMT | Man page Source code |
| convertGeneID | Man page Source code |
| corrbased | Man page Source code |
| corrbasedMrna | Man page Source code |
| createNetwork | Man page Source code |
| drawDotPlot | Man page Source code |
| extractBiotype | Man page Source code |
| filterBiotype | Man page Source code |
| geneGOEnricher | Man page Source code |
| geneListEnrich | Source code |
| genePathwayEnricher | Man page Source code |
| geneRegionGOEnricher | Man page Source code |
| geneRegionPathwayEnricher | Man page Source code |
| getBackGenes | Source code |
| getGoDag | Man page Source code |
| getKeggDiagram | Man page Source code |
| getNearToExon | Man page Source code |
| getNearToIntron | Man page Source code |
| getReactomeDiagram | Man page Source code |
| getTADOverlap | Man page Source code |
| getUCSC | Man page Source code |
| getmiRNACount | Man page Source code |
| goEnrichment | Man page Source code |
| keggPathwayDB | Source code |
| listTAD | Man page Source code |
| mirna | Man page |
| mirnaGOEnricher | Man page Source code |
| mirnaPathwayEnricher | Man page Source code |
| mirnaRegionGOEnricher | Man page Source code |
| mirnaRegionPathwayEnricher | Man page Source code |
| mrna | Man page |
| ncRegion | Man page |
| packageCheck | Man page Source code |
| pathwayEnrichment | Man page Source code |
| predictmiTargets | Man page Source code |
| reactomeEnrichment | Man page Source code |
| reactomePathwayDB | Source code |
| setParameters | Man page Source code |
| tad_dmel | Man page |
| tad_hg19 | Man page |
| tad_hg38 | Man page |
| tad_mm10 | Man page |
| topEnrichment | Man page Source code |
| writeEnrichment | Man page Source code |
