revdep/problems.md

In hadley/stringr: Simple, Consistent Wrappers for Common String Operations

cmcR

• Version: 0.1.9
• GitHub: NA
• Source code: https://github.com/cran/cmcR
• Date/Publication: 2022-02-22 14:00:02 UTC
• Number of recursive dependencies: 117

Run revdepcheck::cloud_details(, "cmcR") for more info

Newly broken

• checking tests ... ERROR `` Running ‘testthat.R’ Running the tests in ‘tests/testthat.R’ failed. Last 13 lines of output: ℹ Please use"highCMCClassif"instead of.data$highCMCClassif`

  ══ Failed ══════════════════════════════════════════════════════════════════════ ── 1. Error ('test-diagnosticTools.R:55'): (code run outside of test_that()) ─ Error in stringr::str_extract_all(., string = ..2$cmcR.info$cellRange, pattern = "[0-9]{1,}"): simplify must be TRUE or FALSE, not the string "rows: 1 - 69, cols: 1 - 69". Backtrace: 1. cmcR::cmcPlot(...) at test-diagnosticTools.R:55:0 8. stringr::str_extract_all(simplify = .)

  ══ DONE ════════════════════════════════════════════════════════════════════════ Keep trying! Error: Test failures Execution halted ```

crispRdesignR

• Version: 1.1.6
• GitHub: NA
• Source code: https://github.com/cran/crispRdesignR
• Date/Publication: 2021-01-11 07:00:02 UTC
• Number of recursive dependencies: 79

Run revdepcheck::cloud_details(, "crispRdesignR") for more info

Newly broken

• checking examples ... ERROR ``` Running examples in ‘crispRdesignR-Ex.R’ failed The error most likely occurred in:

  Name: getofftargetdata

  Title: Off Target Data Frame Creation

  Aliases: getofftargetdata

  ** Examples

  ... Backtrace: ▆ 1. ├─crispRdesignR::sgRNA_design(testseq, usergenome, gtfname, calloffs = FALSE) 2. │ └─stringr::str_replace_all(revsetPAM, "N", ".") 3. │ └─stringr:::check_lengths(string, pattern, replacement) 4. │ └─vctrs::vec_size_common(...) 5. └─vctrs:::stop_scalar_type(...) 6. └─vctrs:::stop_vctrs(...) 7. └─rlang::abort(message, class = c(class, "vctrs_error"), ..., call = vctrs_error_call(call)) Execution halted ```

In both

• checking dependencies in R code ... NOTE Namespaces in Imports field not imported from: ‘DT’ ‘gbm’ All declared Imports should be used.

• checking LazyData ... NOTE 'LazyData' is specified without a 'data' directory

cspp

• Version: 0.3.2
• GitHub: NA
• Source code: https://github.com/cran/cspp
• Date/Publication: 2021-10-16 23:30:19 UTC
• Number of recursive dependencies: 100

Run revdepcheck::cloud_details(, "cspp") for more info

Newly broken

• checking examples ... ERROR ``` Running examples in ‘cspp-Ex.R’ failed The error most likely occurred in:

  Name: get_cspp_data

  Title: Load CSPP data into the R environment

  Aliases: get_cspp_data

  ** Examples

  ... 12. ├─dplyr:::filter.data.frame(., stringr::str_detect(.data$category, cats)) 13. │ └─dplyr:::filter_rows(.data, ..., caller_env = caller_env()) 14. │ └─dplyr:::filter_eval(dots, mask = mask, error_call = error_call) 15. │ ├─base::withCallingHandlers(...) 16. │ └─mask$eval_all_filter(dots, env_filter) 17. └─stringr::str_detect(.data$category, cats) 18. └─stringr:::no_empty() 19. └─cli::cli_abort(...) 20. └─rlang::abort(...) Execution halted ```

• checking re-building of vignette outputs ... WARNING ``` Error(s) in re-building vignettes: --- re-building ‘cspp-vignette.Rmd’ using rmarkdown Loading required package: dplyr

  Attaching package: 'dplyr'

  The following objects are masked from 'package:stats':

  filter, lag
  

  ... vars). Caused by error instringr::str_detect(): !patterncan't be the empty string (""`). --- failed re-building ‘cspp-vignette.Rmd’

  SUMMARY: processing the following file failed: ‘cspp-vignette.Rmd’

  Error: Vignette re-building failed. Execution halted ```

flair

• Version: 0.0.2
• GitHub: https://github.com/kbodwin/flair
• Source code: https://github.com/cran/flair
• Date/Publication: 2020-04-23 18:00:05 UTC
• Number of recursive dependencies: 85

Run revdepcheck::cloud_details(, "flair") for more info

Newly broken

• checking examples ... ERROR ``` Running examples in ‘flair-Ex.R’ failed The error most likely occurred in:

  Name: decorate_code

  Title: Creates an object of the class 'with_flair'

  Aliases: decorate_code

  ** Examples

  ... 8. │ └─flair:::flair_rx.default(...) 9. │ └─... %>% unlist() 10. ├─base::unlist(.) 11. ├─stringr::str_extract_all(., "(\<[^\<\>]\>)|((?<=\>|^)([^\<]|(\<(?=(\-|\<))))(?=\<|$))") 12. │ └─stringr:::check_lengths(string, pattern) 13. │ └─vctrs::vec_size_common(...) 14. └─vctrs:::stop_scalar_type(<fn>(<source>), "string", <env>) 15. └─vctrs:::stop_vctrs(...) 16. └─rlang::abort(message, class = c(class, "vctrs_error"), ..., call = vctrs_error_call(call)) Execution halted ```

• checking tests ... ERROR ``` Running ‘testthat.R’ Running the tests in ‘tests/testthat.R’ failed. Last 13 lines of output: 2. ├─flair:::flair_lines.with_flair(test_wf, c(2:4)) 3. │ └─... %>% map2(1:sum(where_sources), ~ 0:.x + .y) 4. ├─purrr::map2(., 1:sum(where_sources), ~0:.x + .y) 5. ├─purrr::map(., ~str_count(.x, "\n|()")) 6. │ └─flair (local) .f(.x[[i]], ...) 7. │ └─stringr::str_count(.x, "\n|()") 8. │ └─stringr:::check_lengths(string, pattern) 9. │ └─vctrs::vec_size_common(...)

  1. └─vctrs:::stop_scalar_type(<fn>(<source>), "string", <env>)
  2. └─vctrs:::stop_vctrs(...)
  3. └─rlang::abort(message, class = c(class, "vctrs_error"), ..., call = vctrs_error_call(call))

  [ FAIL 2 | WARN 0 | SKIP 0 | PASS 5 ] Error: Test failures Execution halted ```

• checking re-building of vignette outputs ... WARNING ``` Error(s) in re-building vignettes: ... --- re-building ‘how_to_flair.Rmd’ using rmarkdown

  Attaching package: 'dplyr'

  The following objects are masked from 'package:stats':

  filter, lag
  

  ... Quitting from lines 32-43 (how_to_flair.Rmd) Error: processing vignette 'how_to_flair.Rmd' failed with diagnostics: string must be a vector, not a object. --- failed re-building ‘how_to_flair.Rmd’

  SUMMARY: processing the following file failed: ‘how_to_flair.Rmd’

  Error: Vignette re-building failed. Execution halted ```

In both

• checking dependencies in R code ... NOTE Namespaces in Imports field not imported from: ‘dplyr’ ‘evaluate’ ‘ggplot2’ All declared Imports should be used.

• checking LazyData ... NOTE 'LazyData' is specified without a 'data' directory

GetLattesData

• Version: 1.4.1
• GitHub: https://github.com/msperlin/GetLattesData
• Source code: https://github.com/cran/GetLattesData
• Date/Publication: 2022-06-08 12:40:02 UTC
• Number of recursive dependencies: 79

Run revdepcheck::cloud_details(, "GetLattesData") for more info

Newly broken

• checking examples ... ERROR ``` Running examples in ‘GetLattesData-Ex.R’ failed The error most likely occurred in:

  Name: gld_get_lattes_data_from_zip

  Title: Reads zip files from Lattes

  Aliases: gld_get_lattes_data_from_zip

  ** Examples

  ... 2. ├─base::unlist(...) 3. └─base::sapply(...) 4. └─base::lapply(X = X, FUN = FUN, ...) 5. └─GetLattesData (local) FUN(X[[i]], ...) 6. ├─base::which(stringr::str_detect(df.sjr$Issn, issn.in)) 7. └─stringr::str_detect(df.sjr$Issn, issn.in) 8. └─stringr:::no_empty() 9. └─cli::cli_abort(...) 10. └─rlang::abort(...) Execution halted ```

• checking tests ... ERROR ``` Running ‘testthat.R’ Running the tests in ‘tests/testthat.R’ failed. Last 13 lines of output: ▆ 1. └─GetLattesData::gld_get_lattes_data_from_zip(c(f_1, f_2)) at test_gld.R:9:2 2. ├─base::unlist(...) 3. └─base::sapply(...) 4. └─base::lapply(X = X, FUN = FUN, ...) 5. └─GetLattesData (local) FUN(X[[i]], ...) 6. ├─base::which(stringr::str_detect(df.sjr$Issn, issn.in)) 7. └─stringr::str_detect(df.sjr$Issn, issn.in) 8. └─stringr:::no_empty() 9. └─cli::cli_abort(...)

  1. └─rlang::abort(...)

  [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ] Error: Test failures Execution halted ```

• checking re-building of vignette outputs ... WARNING `` Error(s) in re-building vignettes: ... --- re-building ‘gld_vignette-ReadLattes.Rmd’ using rmarkdown Quitting from lines 31-44 (gld_vignette-ReadLattes.Rmd) Error: processing vignette 'gld_vignette-ReadLattes.Rmd' failed with diagnostics:patterncan't be the empty string (""`). --- failed re-building ‘gld_vignette-ReadLattes.Rmd’

  SUMMARY: processing the following file failed: ‘gld_vignette-ReadLattes.Rmd’

  Error: Vignette re-building failed. Execution halted ```

glmmPen

• Version: 1.5.1.10
• GitHub: NA
• Source code: https://github.com/cran/glmmPen
• Date/Publication: 2022-04-29 12:30:07 UTC
• Number of recursive dependencies: 90

Run revdepcheck::cloud_details(, "glmmPen") for more info

Newly broken

• checking tests ... ERROR ``` Running ‘testthat.R’ Running the tests in ‘tests/testthat.R’ failed. Last 13 lines of output: 3. │ ├─testthat (local) .capture(...) 4. │ │ └─base::withCallingHandlers(...) 5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 6. ├─glmmPen::glmmPen(...) 7. │ └─glmmPen:::fD_adj(out = fD_out0) 8. │ └─stringr::str_c(rep(cnms, each = d), ":", levels(group)) 9. │ └─vctrs::vec_size_common(!!!dots)

  1. └─vctrs::stop_incompatible_size(...)
  2. └─vctrs:::stop_incompatible(...)
  3. └─vctrs:::stop_vctrs(...)
  4. └─rlang::abort(message, class = c(class, "vctrs_error"), ..., call = vctrs_error_call(call))

  [ FAIL 4 | WARN 0 | SKIP 0 | PASS 6 ] Error: Test failures Execution halted ```

In both

• checking installed package size ... NOTE installed size is 103.2Mb sub-directories of 1Mb or more: libs 102.2Mb

• checking dependencies in R code ... NOTE Namespace in Imports field not imported from: ‘rstantools’ All declared Imports should be used.

mpwR

• Version: 0.1.0
• GitHub: NA
• Source code: https://github.com/cran/mpwR
• Date/Publication: 2022-06-22 07:30:02 UTC
• Number of recursive dependencies: 96

Run revdepcheck::cloud_details(, "mpwR") for more info

Newly broken

• checking examples ... ERROR ``` Running examples in ‘mpwR-Ex.R’ failed The error most likely occurred in:

  Name: get_Upset_list

  Title: Generate Upset list

  Aliases: get_Upset_list

  ** Examples

  Load libraries

  ... ! pattern can't be the empty string (""). Backtrace: ▆ 1. └─mpwR::get_Upset_list(input_list = data, level = "Precursor.IDs") 2. ├─base::which(...) 3. └─stringr::str_detect(string = names(output_list), pattern = "") 4. └─stringr:::no_empty() 5. └─cli::cli_abort(...) 6. └─rlang::abort(...) Execution halted ```

• checking tests ... ERROR `` Running ‘testthat.R’ Running the tests in ‘tests/testthat.R’ failed. Last 13 lines of output: ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test_Upset.R:72'): get_Upset_list works ───────────────────────────── Error instringr::str_detect(string = names(output_list), pattern = ""):patterncan't be the empty string (""`). Backtrace: ▆

  1. └─mpwR::get_Upset_list(input_list = data, level = "Precursor.IDs") at test_Upset.R:72:3
  2. ├─base::which(...)
  3. └─stringr::str_detect(string = names(output_list), pattern = "")
  4. └─stringr:::no_empty()
  5. └─cli::cli_abort(...)
  6. └─rlang::abort(...)

  [ FAIL 1 | WARN 553 | SKIP 0 | PASS 598 ] Error: Test failures Execution halted ```

• checking re-building of vignette outputs ... WARNING ``` Error(s) in re-building vignettes: --- re-building ‘Import.Rmd’ using rmarkdown --- finished re-building ‘Import.Rmd’

  --- re-building ‘Requirements.Rmd’ using rmarkdown --- finished re-building ‘Requirements.Rmd’

  --- re-building ‘Workflow.Rmd’ using rmarkdown

  Attaching package: 'dplyr' ... Quitting from lines 225-226 (Workflow.Rmd) Error: processing vignette 'Workflow.Rmd' failed with diagnostics: pattern can't be the empty string (""). --- failed re-building ‘Workflow.Rmd’

  SUMMARY: processing the following file failed: ‘Workflow.Rmd’

  Error: Vignette re-building failed. Execution halted ```

postpack

• Version: 0.5.3
• GitHub: https://github.com/bstaton1/postpack
• Source code: https://github.com/cran/postpack
• Date/Publication: 2021-06-02 21:50:02 UTC
• Number of recursive dependencies: 56

Run revdepcheck::cloud_details(, "postpack") for more info

Newly broken

• checking examples ... ERROR ``` Running examples in ‘postpack-Ex.R’ failed The error most likely occurred in:

  Name: match_params

  Title: Find matching node names

  Aliases: match_params

  ** Examples

  load example mcmc.list

  ... Backtrace: ▆ 1. └─postpack::match_params(cjs, "") 2. └─base::lapply(...) 3. └─postpack (local) FUN(X[[i]], ...) 4. └─stringr::str_detect(all_params, x) 5. └─stringr:::no_empty() 6. └─cli::cli_abort(...) 7. └─rlang::abort(...) Execution halted ```

• checking re-building of vignette outputs ... WARNING ``` Error(s) in re-building vignettes: ... --- re-building ‘example-mcmclists.Rmd’ using rmarkdown --- finished re-building ‘example-mcmclists.Rmd’

  --- re-building ‘feature-overview.Rmd’ using rmarkdown Node(s) discarded: "SIG[1,1]", "SIG[2,1]", "SIG[1,2]", and "SIG[2,2]" Node(s) discarded: "SIG[2,1]" ... --- failed re-building ‘multiple-models.Rmd’

  --- re-building ‘pattern-matching.Rmd’ using rmarkdown --- finished re-building ‘pattern-matching.Rmd’

  SUMMARY: processing the following file failed: ‘multiple-models.Rmd’

  Error: Vignette re-building failed. Execution halted ```

In both

• checking Rd cross-references ... NOTE Packages unavailable to check Rd xrefs: ‘rstan’, ‘R2WinBUGS’, ‘R2jags’, ‘R2OpenBUGS’, ‘nimble’, ‘rjags’, ‘jagsUI’

repr

• Version: 1.1.4
• GitHub: https://github.com/IRkernel/repr
• Source code: https://github.com/cran/repr
• Date/Publication: 2022-01-04 14:20:06 UTC
• Number of recursive dependencies: 70

Run revdepcheck::cloud_details(, "repr") for more info

Newly broken

• checking tests ... ERROR ``` Running ‘testthat.R’ Running the tests in ‘tests/testthat.R’ failed. Last 13 lines of output: Backtrace: ▆

  1. └─testthat::expect_match(...) at test_repr_htmlwidget.r:19:8
  2. └─base::stopifnot(is.character(act$val)) ── Error ('test_repr_htmlwidget.r:31'): The dependency manager works ─────────── Error in expect_match(r, "<meta charset=\"utf-8\">\n\t\t<script", fixed = TRUE, all = FALSE): is.character(act$val) is not TRUE Backtrace: ▆
  3. └─testthat::expect_match(...) at test_repr_htmlwidget.r:31:8
  4. └─base::stopifnot(is.character(act$val))

  [ FAIL 3 | WARN 0 | SKIP 0 | PASS 127 ] Error: Test failures Execution halted ```

In both

• checking package dependencies ... NOTE Packages which this enhances but not available for checking: 'data.table', 'vegalite', 'plotly', 'geojsonio'

• checking Rd cross-references ... NOTE Packages unavailable to check Rd xrefs: ‘geojsonio’, ‘plotly’, ‘vegalite’

tidyfst

• Version: 1.7.5
• GitHub: https://github.com/hope-data-science/tidyfst
• Source code: https://github.com/cran/tidyfst
• Date/Publication: 2022-10-27 07:00:02 UTC
• Number of recursive dependencies: 80

Run revdepcheck::cloud_details(, "tidyfst") for more info

Newly broken

• checking examples ... ERROR ``` Running examples in ‘tidyfst-Ex.R’ failed The error most likely occurred in:

  Name: unite_dt

  Title: Unite multiple columns into one by pasting strings together

  Aliases: unite_dt

  ** Examples

  df <- expand.grid(x = c("a", NA), y = c("b", NA)) ... 2. ├─tidyfst::unite_dt(., "merged_name", "") 3. │ └─dt %>% select_dt(...) 4. ├─tidyfst::select_dt(., ...) 5. │ └─... %>% str_c(collapse = ",") 6. ├─stringr::str_c(., collapse = ",") 7. └─stringr::str_subset(names(dt), ., negate = negate) 8. └─stringr:::no_empty() 9. └─cli::cli_abort(...) 10. └─rlang::abort(...) Execution halted ```

In both

• checking Rd cross-references ... NOTE Packages unavailable to check Rd xrefs: ‘fastDummies’, ‘widyr’, ‘pacman’, ‘sjmisc’

tidyft

• Version: 0.4.5
• GitHub: https://github.com/hope-data-science/tidyft
• Source code: https://github.com/cran/tidyft
• Date/Publication: 2020-04-10 10:20:02 UTC
• Number of recursive dependencies: 43

Run revdepcheck::cloud_details(, "tidyft") for more info

Newly broken

• checking examples ... ERROR ``` Running examples in ‘tidyft-Ex.R’ failed The error most likely occurred in:

  Name: unite

  Title: Unite multiple columns into one by pasting strings together

  Aliases: unite

  ** Examples

  df <- CJ(x = c("a", NA), y = c("b", NA)) ... 2. ├─tidyft::unite(., "merged_name", "") 3. │ └─dt %>% select_dt(...) 4. ├─tidyft::select_dt(., ...) 5. │ └─... %>% str_c(collapse = ",") 6. ├─stringr::str_c(., collapse = ",") 7. └─stringr::str_subset(names(dt), ., negate = negate) 8. └─stringr:::no_empty() 9. └─cli::cli_abort(...) 10. └─rlang::abort(...) Execution halted ```

In both

• checking Rd cross-references ... NOTE Packages unavailable to check Rd xrefs: ‘tidyfst’, ‘tidyr’, ‘fastDummies’

• checking LazyData ... NOTE 'LazyData' is specified without a 'data' directory

zipangu

• Version: 0.3.1
• GitHub: https://github.com/uribo/zipangu
• Source code: https://github.com/cran/zipangu
• Date/Publication: 2022-09-01 02:20:03 UTC
• Number of recursive dependencies: 61

Run revdepcheck::cloud_details(, "zipangu") for more info

Newly broken

• checking examples ... ERROR ``` Running examples in ‘zipangu-Ex.R’ failed The error most likely occurred in:

  Name: kansuji2arabic

  Title: Convert kansuji character to arabic

  Aliases: kansuji2arabic kansuji2arabic_all kansuji2arabic_num

  kansuji2arabic_str

  ** Examples

  ... 1. ├─zipangu::kansuji2arabic_str("金一億二千三百四十五万円") 2. │ ├─... %>% unlist() 3. │ └─purrr::map(...) 4. │ └─zipangu (local) .f(.x[[i]], ...) 5. │ └─stringr::str_detect(doc_cha[i], pattern = "") 6. │ └─stringr:::no_empty() 7. │ └─cli::cli_abort(...) 8. │ └─rlang::abort(...) 9. └─base::unlist(.) Execution halted ```

• checking tests ... ERROR ``` Running ‘testthat.R’ Running the tests in ‘tests/testthat.R’ failed. Last 13 lines of output: 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object") 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. ├─zipangu::kansuji2arabic_str("金一億二千三百四十五万六千七百八十九円") 5. │ ├─... %>% unlist() 6. │ └─purrr::map(...) 7. │ └─zipangu (local) .f(.x[[i]], ...) 8. │ └─stringr::str_detect(doc_cha[i], pattern = "") 9. │ └─stringr:::no_empty()

  1. │ └─cli::cli_abort(...)
  2. │ └─rlang::abort(...)
  3. └─base::unlist(.)

  [ FAIL 1 | WARN 0 | SKIP 2 | PASS 142 ] Error: Test failures Execution halted ```

In both

• checking data for non-ASCII characters ... NOTE Note: found 47 marked UTF-8 strings

hadley/stringr documentation built on Nov. 17, 2023, 12:37 a.m.