readSampleData: Read Sample Metadata

Description Usage Arguments Value Author(s) See Also Examples

View source: R/readSampleData.R

Description

Read Sample Metadata

Usage

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readSampleData(file, lanes = 1L)

Arguments

file

File path. Supports CSV, TSV, and XLSX file formats.

lanes

Number of lanes used to split the samples into technical replicates (_LXXX) suffix.

Value

data.frame.

Author(s)

Michael Steinbaugh

See Also

Other Read Functions: readDataVersions, readLog, readProgramVersions, readTx2gene, readYAML

Examples

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# Demultiplexed
x <- readSampleData("http://bcbiobase.seq.cloud/demultiplexed.csv")
glimpse(x)

# Multiplexed (e.g. inDrop single-cell RNA-seq)
x <- readSampleData("http://bcbiobase.seq.cloud/multiplexed.csv")
glimpse(x)

hbc/bcbioBase documentation built on July 10, 2018, 3:50 p.m.