API for hemstrow/snpR
Whole-genome analysis tools for use with SNP data.

Global functions
Facets_in_snpR Man page
add.facets.snpR.data Man page Source code
apply.snpR.facets Man page Source code
calc_association Man page Source code
calc_basic_snp_stats Man page Source code
calc_ho Man page Source code
calc_hwe Man page Source code
calc_maf Man page Source code
calc_p_from_bootstraps Man page Source code
calc_pairwise_fst Source code
calc_pairwise_ld Man page Source code
calc_pi Man page Source code
calc_private Man page Source code
calc_single_stats Man page
calc_smoothed_averages Man page Source code
calc_tajimas_d Man page Source code
call_colony Man page Source code
check.snpR.facet.request Man page Source code
check.snpRdata Source code
check_duplicates Man page Source code
cross_validate_genomic_prediction Man page Source code
do_bootstraps Man page Source code
filter_snps Man page Source code
find.snpR.facets Man page Source code
format_snps Man page Source code
gaussian_weight Man page Source code
get.snpR.stats Man page Source code
import.snpR.data Man page Source code
interpolate_sn Man page Source code
merge.snpR.stats Man page Source code
parse_colony Man page Source code
plot_clusters Man page Source code
plot_pairwise_LD_heatmap Man page Source code
run_colony Man page Source code
run_genomic_prediction Man page Source code
sanity_check_window Man page Source code
snpRdata Man page
snpRdata-class Man page
stickFORMATs Man page
stickRAW Man page
stickSNPs Man page
subset_snpR_data Man page Source code
tabulate_genotypes Man page Source code
write_colony_input Man page Source code
hemstrow/snpR documentation built on July 11, 2019, 8:44 p.m.