R/data.R

#' RNA-Seq from the paper referenced below.
#'
#'
#' @docType data
#' @keywords datasets
#' @name mdd.RNAseq.small
#' @usage data(mdd.RNAseq.small)
#' @format
#' Data frame with 157 mdd and hc subjects with 
#' 500 randomly selected genes from the original 5912 genes.
"mdd.RNAseq.small"

#' case-control interaction effect data
#'
#' @docType data
#' @keywords datasets
#' @name case.control.3sets
#' @usage data(case.control.3sets)
#' @format
#' Data frame with 300 samples (100 samples in train/holdout/test) and 
#' 100 features with moderate (interaction) effect size.
"case.control.3sets"

#' quantitative trait main effect data
#'
#' @docType data
#' @keywords datasets
#' @name qtrait.3sets
#' @usage data(qtrait.3sets)
#' @format
#' Data frame with 300 samples (100 samples in train/holdout/test) and 
#' 100 features with moderate (main) effect size.
"qtrait.3sets"

#' case-control interaction effect data, features only
#'
#' @docType data
#' @keywords datasets
#' @name predictors.mat
#' @usage data(predictors.mat)
#' @format
#' Data frame with 100 samples (100 samples in train/holdout/test) and 
#' 100 features/predictors with moderate (main) effect size.
#' No "class" column.
"predictors.mat"

#' Test data from Rinbix
#'
#' @docType data
#' @keywords datasets
#' @name testdata10
#' @usage data(testdata10)
"testdata10"
insilico/npdr documentation built on July 6, 2023, 1:14 p.m.