API for jae0/bio.models
Package that interacts with bio and associated projects to permit modelling of ODE, PDE and state space models.

Global functions
ICA.core Source code
ICA.optim Source code
NEA_control Source code
NEA_storage Source code
NEA_structure Source code
NEA_throughflow Source code
NEA_u_environs Source code
NEA_utility Source code
Rsquared_glm Source code
adapt.core Source code
adapt.optim Source code
bcratio Source code
biomass.logistic Source code
biomass.logistic.recursion Source code
biomass.logistic.schnute.noequilibrium Source code
blasius Source code
calculate.biomass Source code
check.data Source code
cohort.analysis Source code
devianceGLM Source code
discrete.logistic Source code
estimParamsFromCI Source code
estimate.bulk.diffusion.coefficient Source code
exploitationrate_fishingmortality Source code
extract.vpa.solution Source code
feeding.relations.initialise Source code
find.optim.solution Source code
fishingM Source code
flow.modes Source code
get.vpa.data Source code
holling.functional.response Source code
jags.setup Source code
logistic Source code
logistic.timevarying.Kr Source code
lotka.volterra.2 Source code
lotka.volterra.2D.diffusion Source code
lotka.volterra.2D.diffusion.cyclic.boundaries Source code
lotka.volterra.matrix Source code
lotka.volterra.matrix.logistic.growth Source code
model.pde.define.spatial.domain Source code
model.pde.external.db Source code
model.pde.parameters Source code
model.projections Source code
ms.adapt.core Source code
ms.adapt.optim Source code
odds Source code
optimize_ml Source code
params.ecosystem.structure Source code
params.size.taxa Source code
params.time Source code
params.weights Source code
peaks Source code
perturb.params Source code
perturbation.event Source code
phasePlot Source code
plot.additional.vpa.results Source code
production.biomass.ratio Source code
pvalue.rsquare Source code
run.simulation Source code
sep.VPA.core Source code
sep.VPA.optim Source code
set_global Source code
sim.logistic.data Source code
simul.nonstochastic Source code
simul.stochastic Source code
single.species.2D.logistic Source code
specific.excretion Source code
specific.growth Source code
specific.ingestion Source code
specific.respiration Source code
sql.find.bio Source code
ssa.db Source code
ssa.engine Source code
ssa.engine.approximation Source code
ssa.engine.approximation.rcpp Source code
ssa.engine.approximation.snowcrab Source code
ssa.engine.exact Source code
ssa.model.definition Source code
ssa.nonreactive Source code
ssa.parallel.run Source code
ssa.parameters Source code
summary_deviance Source code
vonB Source code
jae0/bio.models documentation built on Nov. 22, 2017, 1:22 a.m.