Files in jasenfinch/pdi

Phenotypic Index Measures for Oak Decline Severity

.Rbuildignore

.github/.gitignore

.github/workflows/R-CMD-check.yaml

.gitignore

DESCRIPTION

LICENSE

NAMESPACE

NEWS.md R/additionalDescriptors.R R/calcDIs.R R/makeAnalysisTable.R R/mds.R R/minMaxScale.R R/pdi.R R/phenotypingTemplate.R R/preparePhenotypeData.R R/readPhenotypeSheet.R R/reexports.R R/rf.R R/siteAdjustment.R R/siteAdjustmentFactors.R README.md

_pkgdown.yml

codecov.yml

docs/404.html

docs/LICENSE-text.html

docs/articles/index.html

docs/articles/pdi-example.html

docs/articles/pdi-example_files/figure-html/DBH_site_adjusted_plot-1.png

docs/articles/pdi-example_files/figure-html/DBH_site_plot-1.png

docs/articles/pdi-example_files/figure-html/contributions_plot-1.png

docs/articles/pdi-example_files/figure-html/crown_volume_plot-1.png

docs/articles/pdi-example_files/figure-html/unnamed-chunk-3-1.png

docs/articles/pdi-example_files/header-attrs-2.6/header-attrs.js

docs/authors.html

docs/bootstrap-toc.css

docs/bootstrap-toc.js

docs/docsearch.css

docs/docsearch.js

docs/index.html

docs/link.svg

docs/news/index.html

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/Rplot001.png

docs/reference/agrilusExitHoleDensity.html

docs/reference/bleedPrevalence.html

docs/reference/calcDIs.html

docs/reference/crownCondition.html

docs/reference/crownProductionEfficiency.html

docs/reference/crownSurfaceArea.html

docs/reference/crownVolume.html

docs/reference/descriptorContributions.html

docs/reference/index.html

docs/reference/liveCrownRatio.html

docs/reference/makeAnalysisTable.html

docs/reference/mds.html

docs/reference/minMaxScale.html

docs/reference/phenotypingTemplate.html

docs/reference/preparePhenotypeData.html

docs/reference/readPhenotypeSheet.html

docs/reference/reexports.html

docs/reference/rf.html

docs/reference/siteAdjustment.html

docs/reference/siteAdjustmentFactors.html

docs/sitemap.xml

inst/phenotypeDataCollectionSheets/example_site_1.xlsx

inst/phenotypeDataCollectionSheets/example_site_2.xlsx

inst/template/phenotyping_template.xlsx

man/agrilusExitHoleDensity.Rd man/bleedPrevalence.Rd man/calcDIs.Rd man/crownCondition.Rd man/crownProductionEfficiency.Rd man/crownSurfaceArea.Rd man/crownVolume.Rd man/descriptorContributions.Rd man/liveCrownRatio.Rd man/makeAnalysisTable.Rd man/mds.Rd man/minMaxScale.Rd man/phenotypingTemplate.Rd man/preparePhenotypeData.Rd man/readPhenotypeSheet.Rd man/reexports.Rd man/rf.Rd man/siteAdjustment.Rd man/siteAdjustmentFactors.Rd

pdi.Rproj

tests/testthat.R tests/testthat/test-additionalDescriptors.R tests/testthat/test-calcDIs.R tests/testthat/test-minMaxScale.R tests/testthat/test-phenotypingTemplate.R

vignettes/.gitignore

vignettes/pdi-example.Rmd

vignettes/references.bib

jasenfinch/pdi documentation built on Feb. 13, 2021, 2:20 p.m.