Files in jdreyf/ezlimma
Streamlines and extends limma package
.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.gitignore
.travis.yml
CODE_OF_CONDUCT.md
DESCRIPTION
LICENSE
NAMESPACE
R/SMPDB2G.R
R/add_zcols.R
R/batch2design.R
R/clean_filenames.R
R/combine_pvalues.R
R/df_signif.R
R/ezcamerapr.R
R/ezcor.R
R/ezebayes.R
R/eztoptab.R
R/fc2ratio.R
R/fisher_enrichment.R
R/g_index.R
R/gmat2gmt.R
R/grep_cols.R
R/grp_means.R
R/limma_contrasts.R
R/limma_cor.R
R/limma_tost.R
R/logfc2fc.R
R/map_glist.R
R/multiTopTab.R
R/multi_cor.R
R/multi_fisher_enrichment.R
R/prop_changed.R
R/read_gmt.R
R/read_linked_xl.R
R/roast_contrasts.R
R/roast_cor.R
R/roast_multi_cor.R
R/roast_two2one_tailed.R
R/sim_fisher.R
R/two2one_tailed.R
R/write_gmt.R
R/write_linked_xl.R
R/xl_pwys.R
README.md
codecov.yml
ezlimma.Rproj
man/SMPDB2G.Rd
man/add_zcols.Rd
man/batch2design.Rd
man/clean_filenames.Rd
man/combine_pvalues.Rd
man/df_signif.Rd
man/ezcamerapr.Rd
man/ezcor.Rd
man/ezebayes.Rd
man/eztoptab.Rd
man/fc2ratio.Rd
man/fisher_enrichment.Rd
man/g_index.Rd
man/gmat2gmt.Rd
man/grep_cols.Rd
man/grp_means.Rd
man/limma_contrasts.Rd
man/limma_cor.Rd
man/limma_tost.Rd
man/logfc2fc.Rd
man/map_glist.Rd
man/multiTopTab.Rd
man/multi_cor.Rd
man/multi_fisher_enrichment.Rd
man/prop_changed.Rd
man/read_gmt.Rd
man/read_linked_xl.Rd
man/roast_contrasts.Rd
man/roast_cor.Rd
man/roast_multi_cor.Rd
man/roast_two2one_tailed.Rd
man/sim_fisher.Rd
man/two2one_tailed.Rd
man/write_gmt.Rd
man/write_linked_xl.Rd
man/xl_pwys.Rd
tests/testthat.R
tests/testthat/helper-ezlimma.R
tests/testthat/test-SMPDB2G.R
tests/testthat/test-add_zcols.R
tests/testthat/test-clean_filenames.R
tests/testthat/test-ezcamerapr.R
tests/testthat/test-ezcor.R
tests/testthat/test-ezebayes.R
tests/testthat/test-eztoptab.R
tests/testthat/test-fc2ratio.R
tests/testthat/test-fisher_enrichment.R
tests/testthat/test-g_index.R
tests/testthat/test-grep_cols.R
tests/testthat/test-limma_contrasts.R
tests/testthat/test-limma_cor.R
tests/testthat/test-limma_tost.R
tests/testthat/test-map_glist.R
tests/testthat/test-multi_cor.R
tests/testthat/test-multi_fisher_enrichment.R
tests/testthat/test-read_gmt.R
tests/testthat/test-roast_contrasts.R
tests/testthat/test-roast_cor.R
tests/testthat/test-roast_multi_cor.R
tests/testthat/test-utils_general.R
tests/testthat/test-utils_pvalues.R
tests/testthat/test-write_gmt.R
tests/testthat/test-write_linked_xl.R
tests/testthat/test-xl_pwys.R
vignettes/ezlimma-vignette.Rmd
