Man pages for jmarshallnz/islandR
Estimates Source Attribution Probabilities

attributionAttribute cases to sources via MCMC
attribution_ar1Attribute cases to sources via MCMC with an AR(1) model on...
DICGeneric for retrieving the DIC from a model fit
DIC.attributionRetrieve the Deviance Information Critieria (DIC) of an...
get_variableExtract a variable from the posterior of an attribution fit
iterationsGeneric for retrieving the number of iterations from an...
iterations.attributionRetrieve the number of MCMC samples from an attribution...
iterations.sample_distRetrieve the number of iterations from a sample_dist object
manawatuExample human *Campylobacter jejuni* dataset from the...
plot.attributionPlot an attribution object
plot.sample_distProduce a summary plot (stacked barplot) of posterior means
predict.attributionPredict attribution on a new data set
print.attributionPrint an overview of an attribution object
print.sample_distPrint a sample_dist object
print.summary.attributionPrint a summary of an attribution object
st_fitFit the sampling distribution of genotypes to sources using...
st_fit_dirichletFit the sampling distribution of genotypes to sources using a...
st_fit_islandFit the sampling distribution of genotypes to sources using...
summary.attributionRetrieve a summary of an attribution object
summary.sample_distPrint a summary for a sample_dist object
jmarshallnz/islandR documentation built on Aug. 20, 2018, 9:13 a.m.