Man pages for jniedballa/camtrapR
Camera Trap Data Management and Preparation of Occupancy and Spatial Capture-Recapture Analyses
| activityDensity | Plot kernel density estimation of single-species activity |
| activityHistogram | Plot histogram of single-species activity |
| activityOverlap | Plot overlapping kernel densities of two-species activities |
| activityRadial | Radial plots of single-species activity |
| addCopyrightTag | Write a copyright tag into JPEG image metadata |
| addToPath | Add a directory to PATH temporarily |
| appendSpeciesNames | Add or remove species names from JPEG image filenames |
| cameraOperation | Create a camera trap station operation matrix |
| camtrapR-package | Overview of the functions in the camtrapR package |
| camtraps | Sample camera trap station information |
| camtrapsMultiSeason | Sample multi-season camera trap station information |
| checkSpeciesIdentification | Consistency check on species image identification |
| checkSpeciesNames | Check species names against the ITIS taxonomic database |
| commOccu-class | commOccu objects |
| communityModel | Create a community (multi-species) occupancy model for JAGS... |
| createSpeciesFolders | Create species directories for species identification |
| createStationFolders | Create camera trap station directories for raw camera trap... |
| detectionHistory | Species detection histories for occupancy analyses |
| detectionMaps | Generate maps of observed species richness and species... |
| exifTagNames | Show Exif metadata of JPEG images or other image or video... |
| filterRecordTable | Filter species record table for temporal independence |
| fit-commOccu-method | Fit a community (multi-species) occupancy model |
| fixDateTimeOriginal | Fix DateTimeOriginal Exif metadata tag in Reconyx Hyperfire... |
| getSpeciesImages | Collect all images of a species |
| imageRename | Copy and rename images based on camera trap station ID and... |
| OCRdataFields | Optical character recognition (OCR) from data fields in... |
| plot_coef-commOccu-method | Plot effect sizes of covariates in community occupancy model |
| plot_effects-commOccu-method | Plot Marginal Effects of Covariates |
| predict-commOccu-method | Predictions from community occupancy models |
| recordTable | Generate a species record table from camera trap images and... |
| recordTableIndividual | Generate a single-species record table with individual... |
| recordTableIndividualSample | Sample single-species record table with custom metadata from... |
| recordTableIndividualSampleMultiSeason | Sample single-species multi-season record table with custom... |
| recordTableSample | Sample species record table from camera trap images |
| recordTableSampleMultiSeason | Sample multi-season species record table from camera trap... |
| spatialDetectionHistory | Generate a 'capthist' object for spatial capture-recapture... |
| summary-commOccu-method | Summarize community occupancy model |
| surveyDashboard | Shiny dashboard for summarizing and analyzing camera trap... |
| surveyReport | Create a report about a camera trapping survey and species... |
| timeShiftImages | Apply time shifts to JPEG image metadata |
| timeShiftTable | Sample camera trap time shift table |
| writeDateTimeOriginal | Write values to DateTimeOriginal tag in image metadata |
