reset_clustering_methods: Reset to default clustering methods

In jokergoo/simplifyEnrichment: Simplify Functional Enrichment Results

Reset to default clustering methods

Description

Reset to default clustering methods

Usage

reset_clustering_methods()

Details

The default methods are:

kmeans

see cluster_by_kmeans.

pam

see cluster_by_pam.

dynamicTreeCut

see cluster_by_dynamicTreeCut.

mclust

see cluster_by_mclust.

apcluster

see cluster_by_apcluster.

hdbscan

see cluster_by_hdbscan.

fast_greedy

see cluster_by_igraph.

louvain

see cluster_by_igraph.

walktrap

see cluster_by_igraph.

MCL

see cluster_by_MCL.

binary_cut

see binary_cut.

Value

No value is returned.

Examples

all_clustering_methods()
remove_clustering_methods(c("kmeans", "mclust"))
all_clustering_methods()
reset_clustering_methods()
all_clustering_methods()

jokergoo/simplifyEnrichment documentation built on Nov. 3, 2023, 2:57 p.m.