Files in jranke/mkin
Kinetic Evaluation of Chemical Degradation Data

.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
GNUmakefile
NAMESPACE
NEWS.md R/AIC.mmkin.R R/DFOP.solution.R R/FOMC.solution.R R/HS.solution.R R/IORE.solution.R R/SFO.solution.R R/SFORB.solution.R R/add_err.R R/endpoints.R R/geometric_mean.R R/ilr.R R/logLik.mkinfit.R R/max_twa_parent.R R/mkin_long_to_wide.R R/mkin_wide_to_long.R R/mkinds.R R/mkinerrmin.R R/mkinfit.R R/mkinmod.R R/mkinparplot.R R/mkinplot.R R/mkinpredict.R R/mkinresplot.R R/mkinsub.R R/mmkin.R R/plot.mkinfit.R R/plot.mmkin.R R/sigma_twocomp.R R/transform_odeparms.R
README.html
README.md
TODO
_pkgdown.yml
build.log
check.log
data/FOCUS_2006_DFOP_ref_A_to_B.rda
data/FOCUS_2006_FOMC_ref_A_to_F.rda
data/FOCUS_2006_HS_ref_A_to_F.rda
data/FOCUS_2006_SFO_ref_A_to_F.rda
data/FOCUS_2006_datasets.RData
data/mccall81_245T.RData
data/schaefer07_complex_case.RData
data/synthetic_data_for_UBA_2014.rda
data/test_data_from_UBA_2014.rda
docs/NEWS.html
docs/README.html
docs/articles/FOCUS_D.html
docs/articles/FOCUS_D_files/figure-html/plot-1.png
docs/articles/FOCUS_D_files/figure-html/plot_2-1.png
docs/articles/FOCUS_L.html
docs/articles/FOCUS_L_files/figure-html/unnamed-chunk-10-1.png
docs/articles/FOCUS_L_files/figure-html/unnamed-chunk-12-1.png
docs/articles/FOCUS_L_files/figure-html/unnamed-chunk-13-1.png
docs/articles/FOCUS_L_files/figure-html/unnamed-chunk-15-1.png
docs/articles/FOCUS_L_files/figure-html/unnamed-chunk-4-1.png
docs/articles/FOCUS_L_files/figure-html/unnamed-chunk-5-1.png
docs/articles/FOCUS_L_files/figure-html/unnamed-chunk-6-1.png
docs/articles/FOCUS_L_files/figure-html/unnamed-chunk-8-1.png
docs/articles/FOCUS_L_files/figure-html/unnamed-chunk-9-1.png
docs/articles/FOCUS_Z.html
docs/articles/FOCUS_Z.pdf
docs/articles/FOCUS_Z_files/figure-html/FOCUS_2006_Z_fits_1-1.png
docs/articles/FOCUS_Z_files/figure-html/FOCUS_2006_Z_fits_10-1.png
docs/articles/FOCUS_Z_files/figure-html/FOCUS_2006_Z_fits_11-1.png
docs/articles/FOCUS_Z_files/figure-html/FOCUS_2006_Z_fits_11a-1.png
docs/articles/FOCUS_Z_files/figure-html/FOCUS_2006_Z_fits_11b-1.png
docs/articles/FOCUS_Z_files/figure-html/FOCUS_2006_Z_fits_2-1.png
docs/articles/FOCUS_Z_files/figure-html/FOCUS_2006_Z_fits_3-1.png
docs/articles/FOCUS_Z_files/figure-html/FOCUS_2006_Z_fits_5-1.png
docs/articles/FOCUS_Z_files/figure-html/FOCUS_2006_Z_fits_6-1.png
docs/articles/FOCUS_Z_files/figure-html/FOCUS_2006_Z_fits_7-1.png
docs/articles/FOCUS_Z_files/figure-html/FOCUS_2006_Z_fits_9-1.png
docs/articles/compiled_models.html
docs/articles/index.html
docs/articles/mkin.html
docs/articles/mkin_files/figure-html/unnamed-chunk-2-1.png
docs/articles/mkin_vignettes.css
docs/articles/references.bib
docs/articles/twa.html
docs/articles/web_only/FOCUS_Z.html
docs/articles/web_only/FOCUS_Z_files/figure-html/FOCUS_2006_Z_fits_1-1.png
docs/articles/web_only/FOCUS_Z_files/figure-html/FOCUS_2006_Z_fits_10-1.png
docs/articles/web_only/FOCUS_Z_files/figure-html/FOCUS_2006_Z_fits_11-1.png
docs/articles/web_only/FOCUS_Z_files/figure-html/FOCUS_2006_Z_fits_11a-1.png
docs/articles/web_only/FOCUS_Z_files/figure-html/FOCUS_2006_Z_fits_11b-1.png
docs/articles/web_only/FOCUS_Z_files/figure-html/FOCUS_2006_Z_fits_2-1.png
docs/articles/web_only/FOCUS_Z_files/figure-html/FOCUS_2006_Z_fits_3-1.png
docs/articles/web_only/FOCUS_Z_files/figure-html/FOCUS_2006_Z_fits_5-1.png
docs/articles/web_only/FOCUS_Z_files/figure-html/FOCUS_2006_Z_fits_6-1.png
docs/articles/web_only/FOCUS_Z_files/figure-html/FOCUS_2006_Z_fits_7-1.png
docs/articles/web_only/FOCUS_Z_files/figure-html/FOCUS_2006_Z_fits_9-1.png
docs/articles/web_only/compiled_models.html
docs/authors.html
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/jquery.sticky-kit.min.js
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/AIC.mmkin.html
docs/reference/DFOP.solution-1.png
docs/reference/DFOP.solution.html
docs/reference/Extract.mmkin.html
docs/reference/FOCUS_2006_DFOP_ref_A_to_B.html
docs/reference/FOCUS_2006_FOMC_ref_A_to_F.html
docs/reference/FOCUS_2006_HS_ref_A_to_F.html
docs/reference/FOCUS_2006_SFO_ref_A_to_F.html
docs/reference/FOCUS_2006_datasets.html
docs/reference/FOMC.solution-1.png
docs/reference/FOMC.solution.html
docs/reference/HS.solution-1.png
docs/reference/HS.solution.html
docs/reference/IORE.solution-1.png
docs/reference/IORE.solution.html
docs/reference/SFO.solution-1.png
docs/reference/SFO.solution.html
docs/reference/SFORB.solution-1.png
docs/reference/SFORB.solution.html
docs/reference/add_err-1.png
docs/reference/add_err-2.png
docs/reference/add_err-3.png
docs/reference/add_err.html
docs/reference/endpoints.html
docs/reference/geometric_mean.html
docs/reference/ilr.html
docs/reference/index.html
docs/reference/logLik.mkinfit.html
docs/reference/max_twa_parent.html
docs/reference/mccall81_245T.html
docs/reference/mkin_long_to_wide.html
docs/reference/mkin_wide_to_long.html
docs/reference/mkinds.html
docs/reference/mkinerrmin.html
docs/reference/mkinfit.html
docs/reference/mkinmod.html
docs/reference/mkinparplot-1.png
docs/reference/mkinparplot.html
docs/reference/mkinplot.html
docs/reference/mkinpredict.html
docs/reference/mkinresplot-1.png
docs/reference/mkinresplot.html
docs/reference/mkinsub.html
docs/reference/mmkin-1.png
docs/reference/mmkin-2.png
docs/reference/mmkin-3.png
docs/reference/mmkin-4.png
docs/reference/mmkin-5.png
docs/reference/mmkin.html
docs/reference/plot.mkinfit-1.png
docs/reference/plot.mkinfit-2.png
docs/reference/plot.mkinfit-3.png
docs/reference/plot.mkinfit-4.png
docs/reference/plot.mkinfit.html
docs/reference/plot.mmkin-1.png
docs/reference/plot.mmkin-2.png
docs/reference/plot.mmkin-3.png
docs/reference/plot.mmkin.html
docs/reference/print.mkinds.html
docs/reference/print.mkinmod.html
docs/reference/schaefer07_complex_case-1.png
docs/reference/schaefer07_complex_case.html
docs/reference/sigma_twocomp.html
docs/reference/summary.mkinfit.html
docs/reference/synthetic_data_for_UBA.html
docs/reference/test_data_from_UBA_2014-1.png
docs/reference/test_data_from_UBA_2014-2.png
docs/reference/test_data_from_UBA_2014.html
docs/reference/transform_odeparms.html
inst/examples/mkinds.R man/AIC.mmkin.Rd man/DFOP.solution.Rd man/Extract.mmkin.Rd man/FOCUS_2006_DFOP_ref_A_to_B.Rd man/FOCUS_2006_FOMC_ref_A_to_F.Rd man/FOCUS_2006_HS_ref_A_to_F.Rd man/FOCUS_2006_SFO_ref_A_to_F.Rd man/FOCUS_2006_datasets.Rd man/FOMC.solution.Rd man/HS.solution.Rd man/IORE.solution.Rd man/SFO.solution.Rd man/SFORB.solution.Rd man/add_err.Rd man/endpoints.Rd man/geometric_mean.Rd man/ilr.Rd man/logLik.mkinfit.Rd man/max_twa_parent.Rd man/mccall81_245T.Rd man/mkin_long_to_wide.Rd man/mkin_wide_to_long.Rd man/mkinds.Rd man/mkinerrmin.Rd man/mkinfit.Rd man/mkinmod.Rd man/mkinparplot.Rd man/mkinplot.Rd man/mkinpredict.Rd man/mkinresplot.Rd man/mkinsub.Rd man/mmkin.Rd man/plot.mkinfit.Rd man/plot.mmkin.Rd man/print.mkinds.Rd man/print.mkinmod.Rd man/schaefer07_complex_case.Rd man/sigma_twocomp.Rd man/summary.mkinfit.Rd man/synthetic_data_for_UBA.Rd man/test_data_from_UBA_2014.Rd man/transform_odeparms.Rd
test.log
tests/testthat.R tests/testthat/test_FOCUS_D_UBA_expertise.R tests/testthat/test_FOCUS_chi2_error_level.R tests/testthat/test_irls.R tests/testthat/test_mkinpredict_SFO_SFO.R tests/testthat/test_parent_only.R tests/testthat/test_schaefer07_complex_case.R tests/testthat/test_synthetic_data_for_UBA_2014.R tests/testthat/test_twa.R vignettes/FOCUS_D.Rmd
vignettes/FOCUS_D.html
vignettes/FOCUS_L.Rmd
vignettes/FOCUS_L.html
vignettes/mkin.Rmd
vignettes/mkin.html
vignettes/mkin_vignettes.css
vignettes/references.bib
vignettes/twa.Rmd
vignettes/twa.html
vignettes/web_only/FOCUS_Z.Rmd
vignettes/web_only/FOCUS_Z.html
vignettes/web_only/compiled_models.Rmd
vignettes/web_only/compiled_models.html
jranke/mkin documentation built on Dec. 1, 2018, 4:29 a.m.