README.md

In jrklasen/relMM: Mixed Models incopareting relationship matrices

MixedModels

Description:

An R package for (Generalized) Linear Mixed Models (G)LMM incorporating user defined 'G-site' covariance relationship matrices (derived from pedigreemm).

The package was created in order to get things done in my own research; estimation of variance components in quantitative genetics. Any other use case is not tested and may or may not be valid.

Installation:

# install.packages("devtools")
devtools::install_github("jrklasen/MixedModels")

Single observation per level of a random-effect term:

If a random-effect term has single observations per level, but can be distinguished from the residuals by the relationship matrix, the control-argument of mm() can be used in order to bypass the checks.

mm(..., control = lmerControl(check.nobs.vs.nlev = "ignore", 
                              check.nobs.vs.nRE = "ignore"))

jrklasen/relMM documentation built on May 19, 2019, 11:53 p.m.