API for jsemple19/nanodsmf
Analyse nanopore dual enzyme single molecule footprinting data (nanoDSMF)
| Global functions | |
|---|---|
| BSgenomeToDNAStringSet | Man page Source code |
| BSgenomeToGR | Man page Source code |
| DNAStringSetToGR | Man page Source code |
| MCviPI_CpG | Man page |
| MCviPI_GpC | Man page |
| MCviPI_freqCmG | Man page |
| MCviPI_freqGCm | Man page |
| MSssI_CpG | Man page |
| MSssI_GpC | Man page |
| MSssI_freqCmG | Man page |
| MSssI_freqGCm | Man page |
| allNAs | Source code |
| applyGRonGR | Man page Source code |
| findGenomeMotifs | Man page Source code |
| findNonOverlappingMotifs | Man page Source code |
| getIsolatedSites | Man page Source code |
| getOverlappingSites | Man page Source code |
| mIdxToGR | Man page Source code |
| mergeCGandGCmat | Man page Source code |
| mergeCGandGCtsv | Man page Source code |
| plotSingleMoleculesAmp | Man page Source code |
| splitGCGCruns | Man page Source code |
| splitMotifs | Man page Source code |
| splitRangeInPairs | Man page Source code |
| tsvToGR | Man page Source code |
| tsvToMethMat | Man page Source code |
| ttTi5605dna | Man page |
| ttTi5605gr | Man page |
| ucscToWbGR | Man page Source code |
| wbToUcscGR | Man page Source code |
