kbroman/lmem.qtler: Linear Mixed Effects Models for QTL Mapping for Multienvironment and Multitrait Analysis
Version 0.1.2

Performs QTL mapping analysis for balanced and for multi-environment and multi-trait analysis using mixed models. Balanced population, single trait, single environment QTL mapping is performed through marker-regression (Haley and Knott (1992) , Martinez and Curnow (1992) , while multi-environment and multi-trait QTL mapping is performed through linear mixed models. These functions could use any of the following populations: double haploid, F2, recombinant inbred lines, back-cross, and 4-way crosses. Performs a Single Marker Analysis, a Single Interval Mapping, or a Composite Interval Mapping analysis, and then constructs a final model with all of the relevant QTL.

Getting started

Package details

AuthorLucia Gutierrez [aut], Gaston Quero [aut, cre], Schubert Fernandez [aut], Sofia Brandariz [aut], Sebastian Simondi [ctb]
Date of publication2017-09-12 09:45:00
MaintainerGaston Quero <[email protected]>
LicenseGPL-3
Version0.1.2
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("kbroman/lmem.qtler")
kbroman/lmem.qtler documentation built on Sept. 13, 2017, 12:27 a.m.