Files in kingaa/ouch

Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses

.Rbuildignore

.Rprofile

.github/workflows/binary-build.yml

.github/workflows/r-cmd-check.yml

.github/workflows/test-coverage.yml

.gitignore

DESCRIPTION

LICENSE.md

Makefile

NAMESPACE

R/anolis.R R/ape2ouch.R R/as_data_frame.R R/bimac.R R/bootstrap.R R/brown.R R/coef.R R/geospiza.R R/glssoln.R R/hansen.R R/logLik.R R/ouchtree.R R/package.R R/paint.R R/plot.R R/print.R R/rmvnorm.R R/simulate.R R/summary.R R/update.R README.md

codecov.yml

data/anolis.ssd.rda

data/bimac.rda

data/geospiza.rda

examples/anolis.R examples/bimac.R examples/bimac1.R examples/bimac2.R examples/bootstrap.R examples/geospiza.R examples/paint.R

inst/CITATION

inst/GPL

inst/NEWS

inst/NEWS.Rd

inst/doc/Makefile

inst/doc/index.html

inst/doc/index.md man/anolis_ssd.Rd man/as_data_frame.Rd man/bimac.Rd man/bootstrap.Rd man/brown.Rd man/coef.Rd man/geospiza.Rd man/glssoln.Rd man/hansen.Rd man/logLik.Rd

man/macros/citations.Rd

man/ouchtree.Rd man/package.Rd man/paint.Rd man/plot.Rd man/print.Rd man/simulate.Rd man/summary.Rd man/update.Rd

rchk/Makefile

rchk/rchk.out

revdep/.gitignore

revdep/Makefile

revdep/Outputs/check_mvSLOUCH_stderr.txt

revdep/Outputs/check_mvSLOUCH_stdout.txt

revdep/Outputs/check_ouch_stderr.txt

revdep/Outputs/check_ouch_stdout.txt

revdep/Outputs/check_pmc_stderr.txt

revdep/Outputs/check_pmc_stdout.txt

revdep/Outputs/check_surface_stderr.txt

revdep/Outputs/check_surface_stdout.txt

rules.mk

src/covar-matrix.c

src/init.c

src/ouch.h

src/weight-matrix.c

tests/Makefile

tests/ape2ouch.R

tests/ape2ouch.Rout

tests/bapst.R

tests/bapst.Rout.save

tests/bapst.csv

tests/bergmann.R

tests/bergmann.Rout.save

tests/bergmann.csv

tests/boot.R

tests/boot.Rout.save

tests/brown.R

tests/brown.Rout.save

tests/exacttree.R

tests/exacttree.Rout.save

tests/glssoln.R

tests/glssoln.Rout.save

tests/hansen.R

tests/hansen.Rout.save

tests/ouchtree.R

tests/ouchtree.Rout.save

tests/paint.R

tests/paint.Rout.save

tests/plot.R

tests/plot.Rout.save

tests/plot01.png

tests/plot02.png

tests/plot03.png

tests/plot04.png

tests/plot05.png

tests/plot06.png

tests/plot07.png

tests/plot08.png

tests/plot09.png

tests/plot10.png

tests/simtree.R

tests/simtree.Rout.save

tests/snizard.R

tests/snizard.Rout.save

tests/snizard_tree.ape

tests/squamates.csv

tools/check.env

tools/links.ed

kingaa/ouch documentation built on April 3, 2024, 1:34 a.m.