setupPtcomp: setupPtcomp

In kojikoji/ptcomp: What the Package Does (One Line, Title Case)

Description

Seup tibble object which is used for following analysis

Usage

setupPtcomp(count.mat, t.vec, treatment.vec, replicate.vec,
  unit.num = 100)

Arguments

count.mat	numeric matrix, gene (row) * cell (column) matrix
t.vec	numeric vector, pseudo time estimation for each cell
treatment.vec	character vector, experimental treatment for each cell
replicate.vec	character vector, experimental replicate for each cell
unit.num	numeric, how many cells are calculated for one entry of mean expression entry

Details

This function set up the tibble data frame for following analysis

Value

ptcomp tibble

Author(s)

Yasuhiro Kojima

kojikoji/ptcomp documentation built on Nov. 10, 2019, 11:50 a.m.