Files in kollerma/robustlmm
Robust Linear Mixed Effects Models
.Rbuildignore
.github/.gitignore
.github/workflows/check-standard.yaml
.gitignore
.vscode/c_cpp_properties.json
.vscode/launch.json
.vscode/settings.json
DESCRIPTION
NAMESPACE
R/AllClass.R
R/AllGeneric.R
R/DAS-scale.R
R/accessors.R
R/asymptoticEfficiency.R
R/emmeans.R
R/fit.effects.R
R/fitDatasets.R
R/fromLme4.R
R/generateAnovaDatasets.R
R/generateMixedEffectDatasets.R
R/generateSensitivityCurveDatasets.R
R/ghq.R
R/helpers.R
R/lmer.R
R/manageDatasets.R
R/mutators.R
R/plot.R
R/processFile.R
R/processFit.R
R/psiFunc2.R
R/rlmer.R
R/simulationStudies.R
README.md
inst/CITATION
inst/doc/Penicillin.R
inst/doc/ggplot.theme.R
inst/doc/plots.R
inst/doc/sleepstudy.R
inst/simulationStudy/breakdown.R
inst/simulationStudy/consistencyAndEfficiencyBlockDiagonal.R
inst/simulationStudy/consistencyAndEfficiencyDiagonal.R
inst/simulationStudy/convergence.R
inst/simulationStudy/datasets_breakdown-processed.Rdata
inst/simulationStudy/datasets_consistencyAndEfficiencyBlockDiagonal-aggregated.Rdata
inst/simulationStudy/datasets_consistencyAndEfficiencyBlockDiagonal-minimal.Rdata
inst/simulationStudy/datasets_consistencyAndEfficiencyDiagonal-aggregated.Rdata
inst/simulationStudy/datasets_consistencyAndEfficiencyDiagonal-minimal.Rdata
inst/simulationStudy/datasets_convergence-aggregated.Rdata
inst/simulationStudy/datasets_convergence_10_10_NN-minimal.Rdata
inst/simulationStudy/datasets_convergence_10_10_t3t3-minimal.Rdata
inst/simulationStudy/datasets_convergence_10_20_NN-minimal.Rdata
inst/simulationStudy/datasets_convergence_10_20_t3t3-minimal.Rdata
inst/simulationStudy/datasets_convergence_10_50_NN-minimal.Rdata
inst/simulationStudy/datasets_convergence_10_50_t3t3-minimal.Rdata
inst/simulationStudy/datasets_convergence_10_5_NN-minimal.Rdata
inst/simulationStudy/datasets_convergence_10_5_t3t3-minimal.Rdata
inst/simulationStudy/datasets_convergence_20_10_NN-minimal.Rdata
inst/simulationStudy/datasets_convergence_20_10_t3t3-minimal.Rdata
inst/simulationStudy/datasets_convergence_20_20_NN-minimal.Rdata
inst/simulationStudy/datasets_convergence_20_20_t3t3-minimal.Rdata
inst/simulationStudy/datasets_convergence_20_50_NN-minimal.Rdata
inst/simulationStudy/datasets_convergence_20_50_t3t3-minimal.Rdata
inst/simulationStudy/datasets_convergence_20_5_NN-minimal.Rdata
inst/simulationStudy/datasets_convergence_20_5_t3t3-minimal.Rdata
inst/simulationStudy/datasets_convergence_50_10_NN-minimal.Rdata
inst/simulationStudy/datasets_convergence_50_10_t3t3-minimal.Rdata
inst/simulationStudy/datasets_convergence_50_20_NN-minimal.Rdata
inst/simulationStudy/datasets_convergence_50_20_t3t3-minimal.Rdata
inst/simulationStudy/datasets_convergence_50_50_NN-minimal.Rdata
inst/simulationStudy/datasets_convergence_50_50_t3t3-minimal.Rdata
inst/simulationStudy/datasets_convergence_50_5_NN-minimal.Rdata
inst/simulationStudy/datasets_convergence_50_5_t3t3-minimal.Rdata
inst/simulationStudy/datasets_convergence_5_10_NN-minimal.Rdata
inst/simulationStudy/datasets_convergence_5_10_t3t3-minimal.Rdata
inst/simulationStudy/datasets_convergence_5_20_NN-minimal.Rdata
inst/simulationStudy/datasets_convergence_5_20_t3t3-minimal.Rdata
inst/simulationStudy/datasets_convergence_5_50_NN-minimal.Rdata
inst/simulationStudy/datasets_convergence_5_50_t3t3-minimal.Rdata
inst/simulationStudy/datasets_convergence_5_5_NN-minimal.Rdata
inst/simulationStudy/datasets_convergence_5_5_t3t3-minimal.Rdata
inst/simulationStudy/datasets_robustnessBlockDiagonal-aggregated.Rdata
inst/simulationStudy/datasets_robustnessBlockDiagonal-minimal.Rdata
inst/simulationStudy/datasets_robustnessDiagonal-aggregated.Rdata
inst/simulationStudy/datasets_robustnessDiagonal-minimal.Rdata
inst/simulationStudy/datasets_scaleFirstGroup-processed.Rdata
inst/simulationStudy/datasets_shiftFirstGroup-processed.Rdata
inst/simulationStudy/datasets_shiftFirstObservation-processed.Rdata
inst/simulationStudy/randomNumberGenerators.R
inst/simulationStudy/robustnessBlockDiagonal.R
inst/simulationStudy/robustnessDiagonal.R
inst/simulationStudy/sensitivityCurves.R
inst/xtraR/benchmarkingCImplementation.R
inst/xtraR/effect.R
man/asymptoticEfficiency.Rd
man/bindDatasets.Rd
man/chgDefaults.Rd
man/compare.Rd
man/createDatasetsFromList.Rd
man/createRhoFunction.Rd
man/extractTuningParameter.Rd
man/fitDatasets.Rd
man/generateAnovaDatasets.Rd
man/generateMixedEffectDatasets.Rd
man/generateSensitivityCurveDatasets.Rd
man/getME.Rd
man/lapplyDatasets.Rd
man/loadAndMergePartialResults.Rd
man/mergeProcessedFits.Rd
man/other.Rd
man/partialMoment_standardNormal.Rd
man/plot-methods.Rd
man/plot.rlmerMod.Rd
man/prepareMixedEffectDataset.Rd
man/processDatasetsInParallel.Rd
man/processFile.Rd
man/processFit.Rd
man/psi-functions.Rd
man/psi2propII.Rd
man/residuals.rlmerMod.Rd
man/rlmer.Rd
man/rlmerMod-class.Rd
man/robustlmm-package.Rd
man/saveDatasets.Rd
man/shortenLabelsKS2022.Rd
man/splitDatasets.Rd
man/viewCopyOfSimulationStudy.Rd
robustlmm.Rproj
src/Integration.cpp
src/Integration.h
src/Makevars
src/Makevars.win
src/PsiFunction.cpp
src/PsiFunction.h
src/globals.h
src/local_stubs.c
src/misc.cpp
src/misc.h
src/rlmerMatrixUtils.cpp
src/rlmerMatrixUtils.h
src/robustlmm_init.cpp
tests/DAS-scale.R
tests/DASvar-fallback.R
tests/PsiFunction.R
tests/asymptoticEfficiency.R
tests/compare-methods.R
tests/compare-methods.Rout.save
tests/expectations.R
tests/fitDatasets.R
tests/genericFunctions.R
tests/getME.R
tests/getME.Rout.save
tests/multipleGroupingFactorsTestData.R
tests/offset.R
tests/psi-rho-funs.R
tests/rlmerMod.R
tests/simulationStudies.R
tests/subset.R
tests/tau.R
tests/testMatrices.R
tests/weights.R
tools/debug.R
vignettes/Figures/fig-convergence.pdf
vignettes/Figures/fig-ex-penicillin-contaminated.pdf
vignettes/efficiency-table-B-optimal.tex
vignettes/efficiency-table-lqq-locationScale.tex
vignettes/efficiency-table-lqq.tex
vignettes/jsslogo.pdf
vignettes/rlmer.Rnw
vignettes/rlmer.bib
vignettes/rlmer.sty
vignettes/simulationStudies.Rnw
vignettes/simulationStudies.bib
vignettes/tuning-constants-table.tex
