laurieKell/mpb
Management Procedures

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laurieKell/mpb: Management Procedures
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API

API for laurieKell/mpb
Management Procedures

Global functions
.calcSigma Source code
.writeAspicInp Source code
FLBRP2biodyn Source code
FLBRPs2FLBRP Source code
FLQuantJKs Man page
FLQuantJKs,ANY-method Man page
FLQuantJKs,FLQuantJKs-method Man page
FLQuantJKs,list-method Man page
FLQuantJKs,missing-method Man page
FLQuantJKs-class Man page
FLQuantJKs-methods Man page
FLQuants2FLQuant Source code
FLStock2biodynSimple Source code
FLStocks2FLStock Source code
K Man page Source code
NewRhap Source code
activeParams Source code
admbCor Source code Source code
admbFit Source code
admbProfile Source code
alkMFCL Man page Source code
alpha Source code
as Man page
as2bs Source code
aspic Man page
aspic,ANY,ANY-method Man page
aspic,ANY-method Man page
aspic,FLQuant-method Man page
aspic,FLStock,missing-method Man page
aspic,biodyn,FLQuant-method Man page
aspic,biodyn,FLQuants,FLQuant-method Man page
aspic,biodyn,FLQuants-method Man page
aspic,character,missing,FLQuant-method Man page
aspic,character,missing-method Man page
aspic,character-method Man page
aspic,data.frame,missing,FLQuant-method Man page
aspic,data.frame,missing-method Man page
aspic,data.frame-method Man page
aspic,missing Man page
aspic,missing,missing,FLQuant-method Man page
aspic,missing,missing-method Man page
aspic,missing-method Man page
aspic-class Man page
aspic-method Man page
aspic2biodyn Source code
aspics Man page
aspics,ANY-method Man page
aspics,aspic-method Man page
aspics,character-method Man page
aspics,list-method Man page
aspics,missing-method Man page
aspics-class Man page
aspics-method Man page
aspics-methods Man page
aspics2biodyns Source code
bdTimeSeries Source code
beta Source code
bias Source code
biodyn Man page
biodyn,FLPar-method Man page
biodyn,FLQuant,FLPar-method Man page
biodyn,FLQuant,missing-method Man page
biodyn,FLStock,FLPar-method Man page
biodyn,FLStock,missing-method Man page
biodyn,biodyn,FLQuant-method Man page
biodyn,biodyn,FLQuants-method Man page
biodyn,biodyn,data.frame-method Man page
biodyn,character,FLPar-method Man page
biodyn,character,missing-method Man page
biodyn,factor,FLPar-method Man page
biodyn,factor,missing-method Man page
biodyn,missing Man page
biodyn,missing,FLPar-method Man page
biodyn,missing,missing-method Man page
biodyn-class Man page
biodyn2aspic Source code
biodynCpue2aspic Source code
biodyns,biodyn-method Man page
bmsy Man page
bmsy,FLPar-method Man page
bmsy,aspic-method Man page
bmsy,biodyn-method Man page
bmsy-method Man page
bmsyFletcher Source code
bmsyFn Source code
bmsyFox Source code
bmsyGenfit Source code
bmsyGulland Source code
bmsyLogistic Source code
bmsyPellaT Source code
bmsySchaefer Source code
bmsyShepherd Source code
boot Man page
boot,aspic-method Man page
boot,aspics-method Man page
boot,biodyn-method Man page
boot-method Man page
bootFn Source code
calcB0 Source code
calcElasticity Source code
calcLl Source code
calcLogLik Source code
calcObjFn Source code
calcObjFn2 Source code
calcQ Source code
calcQFLQuant Source code
calcSS Source code
calcSigma Source code Source code
catch,aspic-method Man page
catch<- Man page
checkFile Source code
chkIters Man page Source code
control,biodyn-method Man page
control<-,biodyn,FLPar-method Man page
controlFn Man page Source code
cooksdFn Source code
corJK Source code
covJK Source code
createFLAccesors Source code Source code
cv Source code
cv2 Source code
dFinalPrior Source code
dInitialPrior Source code
defaultParams Source code
demoBiodyn Source code
demoBiodyn2 Source code
dfbetaFn Source code
diags Man page
diagsFn Man page Source code
dif Source code
ee Source code
fCPP Source code
fapexAge Man page Source code
feasible Man page
feasible,FLPar,FLQuant-method Man page
feasible,biodyn,missing-method Man page
feasible,data.frame,FLQuant-method Man page
feasibleFn Source code
feasibleFn2 Source code Source code
feasibleFn3 Source code
fit Man page
fit,FLPar,FLQuant-method Man page
fit,aspic,missing-method Man page
fit,aspic-method Man page
fit,aspics,missing-method Man page
fit,aspics-method Man page
fit,biodyn,FLQuant-method Man page
fit,biodyn,FLQuantJK-method Man page
fit,biodyn,FLQuantJKs-method Man page
fit,biodyn,FLQuants-method Man page
fitPella Man page
flqs2flq Source code
fmsy Man page
fmsy,FLPar-method Man page
fmsy,aspic-method Man page
fmsy,biodyn-method Man page
fmsy-method Man page
fmsyFletcher Source code
fmsyFn Source code
fmsyFox Source code
fmsyGulland Source code
fmsyLogistic Source code
fmsyPellaT Source code
fmsySchaefer Source code
fmsyShepherd Source code
fn Source code
fnF Source code
fnFLQuant Source code
fnKobe Source code
fnMSY Source code
fnPf Source code
fnProfile Man page Source code
fnY Source code
func Source code
funcB Source code
funcF Source code
funcJ Source code
funcY Source code
fwd,FLPar,missing,missing Man page
fwd,FLPar,missing-method Man page
fwd,biodyn,FLQuants,missing Man page
fwd,biodyn,FLQuants-method Man page
fwd,biodyn,missing,missing Man page
fwd,biodyn,missing,missing-method Man page
fwd,biodyn,missing-method Man page
fwd-method Man page
fwdFn Source code
getADMBHessian Source code
getBiodyn Source code
getDiags Source code
getFile Source code
getOM Source code
getP Source code
getParams Source code
getPath Source code
getPella Source code
getRK Source code
getplotdat1 Source code
getplotdat4 Source code
gradF Source code
gradMinF Source code
gradMinY Source code
gradY Source code
gridFn Source code
guessK Source code
harvest Man page
harvest'=catch(om)/stock(om)%/%(brp@refpts['msy','yield']/brp@re Man page
harvest,aspic-method Man page
harvest,biodyn,missing-method Man page
harvest,biodyn-method Man page
hcr,FLStock,FLBRP-method Man page
hcr,biodyn,FLPar-method Man page
hcr,biodyn-method Man page
hcrFn Source code Source code
hcrFn2 Source code
hcrParam Man page Source code Source code
hrate Man page
hrate,aspic-method Man page
hrate,biodyn-method Man page
hyperstability Source code
iRate Source code
iUAspic Source code
iavFn Source code
is.aspic Man page
is.biodyn Man page Source code
jabba2biodyn Source code
jabbaCOM Source code
jabbaComOld Source code
jabbaComSetup Source code
jabbaComXvl Source code
jabbas2biodyns Source code
jackSmry Source code
jackSmryFn Source code
jackknifeKey Source code
jk Man page
jk,aspic-method Man page
jk,biodyn,FLQuant-method Man page
jk,biodyn,FLQuants-method Man page
jkIdx Source code
kobe Man page
kobe,biodyn,missing-method Man page
kobe,biodyns,ANY-method Man page
kobe,biodyns,missing-method Man page
kobeFn Source code
kobeMar Source code
llQ Source code
llSigma Source code
logLikeFn Source code
loglFn Source code
ma Source code Source code
maxFn Source code
mfclGrw Man page Source code
mfclLfd Source code
minF Source code
minFn Source code
minY Source code
mixnorm Man page Source code
modelParams Source code Source code
mse Man page
mseBiodyn Man page Source code
msy Man page
msy,FLPar-method Man page
msy,aspic,missing-method Man page
msy,aspic-method Man page
msy,biodyn-method Man page
msy-method Man page
msy2pellatFn Source code
msyFletcher Source code
msyFn Source code
msyFox Source code
msyGenfit Source code
msyGulland Source code
msyLogistic Source code
msyPellaT Source code
msySchaefer Source code
msyShepherd Source code
mvn Man page Source code
nll,FLQuant,FLQuant,FLPar-method Man page
nll,FLQuant,FLQuants,FLPar-method Man page
nll,biodyn,FLQuant,missing-method Man page
nll,biodyn,FLQuants,missing-method Man page
nllFn Source code
nmcFn Man page Source code
nr Source code
numeric,FLPar,FLPar-method Man page
numeric,FLQuant,FLQuant-method Man page
numeric,biodyn,biodyn-method Man page
objLog Source code
om Man page
p Source code
pFn Source code
paramFn Source code
plot,aspics,missing Man page
plot,biodyn,missing-method Man page
plot,biodyns,missing-method Man page
plotCcFn Source code
plotCcf,FLQuants-method Man page
plotCcf,biodyns,missing-method Man page
plotComp Source code
plotComps Source code
plotEql,biodyn,FLQuant Man page
plotEql,biodyn,missing-method Man page
plotEqlfn Source code
plotHcr,biodyn-method Man page
plotHcr-method Man page
plotIndex,FLQuants,missing-method Man page
plotIndex,FLQuants-method Man page
plotIndex,aspic,missing-method Man page
plotIndex,biodyn Man page
plotIndex,biodyn,missing-method Man page
plotIndexFn Source code
plotIndexResidual,FLQuants,missing-method Man page
plotIndexResidual,FLQuants-method Man page
plotIndexResidual,aspic,missing-method Man page
plotIndexResidual,biodyn,missing-method Man page
plotIndexResidualFn Source code
plotJack Man page Source code
plotMSE,biodyn,FLStock,FLBRP-method Man page
plotMSEfn Man page Source code
plotProdfn Source code Source code
plotProduction Man page Source code
plotProduction,biodyn,FLBRP-method Man page
plotProduction,biodyn,FLQuant-method Man page
plotProduction,biodyn,missing-method Man page
plotProduction,biodyns,missing-method Man page
plotProductionfn Source code
plotSP Source code
prdFn Source code
press Source code
prj Source code
production,FLStock,missing Man page
production,biodyn,FLQuant Man page
production,biodyn-method Man page
productionFn Man page Source code Source code
profileFn Man page Source code Source code
profileFn2 Source code
profileGrid Source code
r2b Source code
rLen Source code
rand, Man page
rand,numeric,FLPar,FLPar-method Man page
rand,numeric,FLQuant,FLQuant-method Man page
rand,numeric,biodyn,biodyn-method Man page
rand,numeric,biodyn-method Man page
rand-method Man page
randFn Man page Source code
randJack,numeric,FLPar,FLPar-method Man page
randJack,numeric,FLQuant,FLQuant-method Man page
randJack,numeric,biodyn,biodyn-method Man page
randJack,numeric,biodyn-method Man page
randJack-method Man page
randJackFn Man page Source code
read.admb Source code
read.psv Source code
read.rep Source code
readADMB Source code
readAspic Man page
readAspic,character-method Man page
refJacobian Source code
refTimeSeries Source code
refptSD Man page
refptSD,biodyn,missing-method Man page
refptSD,character,FLPar-method Man page
refptSD,factor,FLPar-method Man page
refpts,FLPar,missing-method Man page
refpts,aspic,missing-method Man page
refpts,biodyn,missing-method Man page
refpts,character,FLPar-method Man page
refpts,factor,FLPar-method Man page
refptsFn Source code
refs Source code
relDif Source code
relFn Source code
relVar Source code
resample,FLPar-method Man page
resample,FLQuant-method Man page
runExe Source code
scale Source code Source code
scanText Source code
series Source code
setControl<-,aspic,FLPar-method Man page
setControl<-,biodyn,FLPar-method Man page
setControl<-,biodyn,FLQuant-method Man page
setControl<-,biodyn,FLQuants-method Man page
setExe Source code
setExePath Source code
setIndexFn Source code
setMP Source code
setParams<- Man page
setParams<-, Man page
setParams<-,aspic,data.frame-method Man page
setParams<-,biodyn,FLPar-method Man page
setParams<-,biodyn,FLQuant-method Man page
setParams<-,biodyn,FLQuants-method Man page
setParams<-,biodyn,data.frame-method Man page
setPella Source code
setQ Source code
sim,FLStock,ANY-method Man page
sim,missing,missing-method Man page
sim-method Man page
slv Source code
smryBiodyns Source code
smryFn Source code
sra Source code
statusErrFn Source code
stockCPP Source code
tac Man page
tac,biodyn-method Man page
tac-method Man page
timeSeries Man page
timeSeries,FLStock,FLBRP-method Man page
timeSeries,FLStock,FLPar-method Man page
timeSeries,FLStocks,FLBRP-method Man page
timeSeries,FLStocks,FLBRPs-method Man page
timeSeries,aspic,missing-method Man page
timeSeries,biodyn,missing-method Man page
timeSeries-method Man page
tmp Source code
ts,FLStock,FLBRP-method Man page
ts,FLStock,FLPar-method Man page
ts,FLStocks,FLBRP-method Man page
ts,FLStocks,FLBRPs-method Man page
ts,biodyn,FLPar-method Man page
udms Source code
vFLQs Source code
validAspic Source code
validIndex Source code
validity Source code Source code Source code
weighted.var.se Source code
whooow Source code
writeADMB Source code
writeAspic Man page
writeAspic,aspic-method Man page
xval,biodyn,ANY-method Man page
xval,biodyn,missing-method Man page
xval,biodyn-method Man page
xval-method Man page
xvalFnAspic Source code
xvalFnBiodyn Source code
yield Source code
laurieKell/mpb documentation built on Sept. 9, 2023, 9:47 p.m.

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