Man pages for lourencoj/MBVS-R-Package
Mosquito-born Viral Suitability

estimateAllFactorsEstimates the factors Alpha, Eta and Rho.
exportCSV_allFactorsExports the estimated factors Alpha, Rho and Eta into csv...
exportCSV_EntomologicalExports the estimated entomological parameters of mosquito...
exportCSV_indexPExports the index P estimations into a csv file. Includes...
getClimateInputFileGet the file name and path of the climatic series input.
getHumanIncPmeanGet the mean human incubation period.
getHumanInfPmeanGet the mean human infectious period.
getHumanLEmeanYearsGet the mean human life-span duration.
getHumanMosqTransPGet the mean human to mosquito probability of transmission...
getMosqBRpriorGet the prior for the mosquito bitting rate.
getMosqIPpriorGet the prior for the mosquito incubation period.
getMosqLEpriorGet the prior for the mosquito lifespan.
help_globalVariablesShows detailed information global variables used by MbVS.
help_inputFormatShows detailed information on the required csv format for the...
loadAndDigestClimateSeriesReads the climatic series and applies some required...
MbVS-packageMbVS: A package for estimating (M)osquito-(b)orne (V)iral...
plotPDF_debugIndexPPlots and exports a simple figure (mostly) for debug...
plotPNG_debugChainsPlots and exports a simple figure (mostly) for debug...
plotPNG_debugDistributionsPlots and exports a simple figure (mostly) for debug...
plotPNG_debugEntomologicalPlots and exports a simple figure (mostly) for debug...
plotPNG_debugIndexPPlots and exports a simple figure (mostly) for debug...
setHumanIncPmeanDaysSet the mean human incubation period.
setHumanInfPmeanDaysSet the mean human infectious period.
setHumanLifeEmeanYearsSet the mean human life-span duration.
setHumanMosqTransPSet the mean human to mosquito probability of transmission...
setMosqBiteRpriorSet the prior for the mosquito bitting rate. The given mean...
setMosqIncPpriorSet the prior for the mosquito incubation period. The given...
setMosqLifeEpriorSet the prior for the mosquito lifespan. The given mean and...
setOutputFilePathAndTagSet the file name and path of the climatic series input.
simulateIndexPEstimates the index P by simulation. That is, the estimated...
lourencoj/MBVS-R-Package documentation built on Dec. 16, 2017, 4:03 a.m.