retrieve_deg_table: Differential Expression results

In luciorq/txomics: Functional Analysis and Visualization of Transcriptomic Data

Description

Filter upregulated and downregulated genes from Differential expression analysis in a table

Usage

retrieve_deg_table(..., pvalue = 0.05, fdr = FALSE, names = NULL)

Arguments

...	de_analysis or gsea_analysis results data frames
pvalue	p-value cut-off for enrichment or differential consideration, default = 0.05
fdr	logical, default = FALSE should False discovery rate adjusted pvalue be used instead of pvalue
names	vector with names to be used for each group

luciorq/txomics documentation built on Sept. 3, 2020, 5:36 a.m.