plot_detail: Plot detail view of Conumee analysis result

Description Usage Arguments Value

View source: R/35_cnv.R

Description

Plot detail view of Conumee analysis result

Usage

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plot_detail(cnv_anl, outdir, plot_file = NULL, width = 2100,
  height = 1000, ...)

Arguments

cnv_anl

A CNV.analysis object (single sample)

outdir

A character scalar of output directory

plot_file

A character scalar of genome plot file name. Default is sample name + "-detail.png". For example, if sample name is "MA001", it will be "MA001-detail.png".

width

A numeric scalar of plot width in pixel. Default is 2100.

height

A numeric scalar of plot height in pixel. Default is 1000.

...

Any arguments can be passed on png()

Value

A CNV.analysis object (invisible).


markgene/sjmat documentation built on April 26, 2018, 4:13 p.m.