Scale gc- and mappability-corrected read counts to absolute copy number.
Object of class IRanges containing tumour data, obtained from a call to gcCorrect
Expected peak positions. Data frame returned by ePeakPos.
An additional column named icopy is added to tumourrangedata (tumourrangedata$icopy). Scaling is done by using the relationship given in epp: each integer copy number configurations in tumour (m1,p1,m2,p2,etc) is associated with the expected gc- and mappability-corrected read count (in x). Values for icopy are in the copy-number scale (as opposed to tumourrangedata$copy which is in a log scale).
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