README.md

In mcanouil/rain: Reference-based Ancestry INference

Reference-based Ancestry INference

Installation

# Install rain from CRAN:
install.packages("rain")

# Or the the development version from GitHub:
# install.packages("remotes")
remotes::install_github("umr1283/rain")

Overview

• estimate_ethnicity() allows to format VCF files and compute the genomic components (and some figures) for ethnicity using flashpca software
• pca_report() allows to compute an analysis report using principal component analysis from flashpca software.

Getting help

If you encounter a clear bug, please file a minimal reproducible example on github. For questions and other discussion, please contact the package maintainer.

Code of Conduct

Please note that the rain project is released with a Contributor Code of Conduct. By contributing to this project, you agree to abide by its terms.

mcanouil/rain documentation built on Nov. 28, 2022, 10:40 a.m.