find_optima: Find Optima
In microbiome/microbiome: Microbiome Analytics
View source: R/potential_analysis.R
find_optima R Documentation
Find Optima
Description
Detect optima, excluding local optima below peak.threshold.
Usage
find_optima(f, peak.threshold = 0, bw = 1, min.density = 1)
Arguments
f
density
peak.threshold
Mode detection threshold
bw
bandwidth
min.density
Minimun accepted density for a maximum;
as a multiple of kernel height
Value
A list with min (minima), max (maxima), and
peak.threshold (minimum detection density)
Author(s)
Leo Lahti leo.lahti@iki.fi
References
See citation('microbiome')
Examples
# Not exported
# o <- find_optima(rnorm(100), bw=1)
microbiome/microbiome documentation built on Aug. 22, 2023, 7:12 a.m.
R Package Documentation
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View source: R/potential_analysis.R
| find_optima | R Documentation |
Find Optima
Description
Detect optima, excluding local optima below peak.threshold.
Usage
find_optima(f, peak.threshold = 0, bw = 1, min.density = 1)
Arguments
f |
density |
peak.threshold |
Mode detection threshold |
bw |
bandwidth |
min.density |
Minimun accepted density for a maximum; as a multiple of kernel height |
Value
A list with min (minima), max (maxima), and peak.threshold (minimum detection density)
Author(s)
Leo Lahti leo.lahti@iki.fi
References
See citation('microbiome')
Examples
# Not exported
# o <- find_optima(rnorm(100), bw=1)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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