mikelove/tximeta: Transcript Quantification Import with Automatic Metadata

Transcript quantification import from Salmon with automatic population of metadata and transcript ranges. Filtered, combined, or de novo transcriptomes can be linked to the appropriate sources with linkedTxomes and shared for reproducible analyses.

Getting started

Package details

Bioconductor views Annotation DataImport GeneExpression ImmunoOncology Preprocessing RNASeq Transcription Transcriptomics
MaintainerMichael Love <[email protected]>
URL https://github.com/mikelove/tximeta
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
mikelove/tximeta documentation built on Nov. 6, 2019, 1:49 p.m.