R/pipelineNGS.R

In mireia-bioinfo/pipelineNGS: Methods for Epigenetic Data Processing

#' Pipeline for Next-Generation Sequencing Experiments
#' 
#' This package provides an R implementation to several tools and scripts for NGS alignment and post-processing.
#' 
#' PipelineNGS is designed to facilitate the implementation of a full NGS pipeline and downstream analysis in R. It contains several wrapper functions, where arguments are passed to the command line-tools and processes are therefore run as if it were in the terminal.
#' 
#' @docType package
#' @name pipelineNGS
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