README.md
In ms609/tci: Quantify the Balance of Phylogenetic Trees
TotalCopheneticIndex
R package implementing the Total Cophenetic Index measure of Mir et al. (2013).
This package is now simply a wrapper for the function TotalCopheneticIndex()
in the package 'TreeTools'.
The total cophenetic index describes how balanced a phylogenetic tree is,
by measuring the how deep the most recent common ancestor of each pair of leaves
lies within the tree.
See also
This functionality is now available via the function TotalCopheneticIndex() in the
'TreeTools' package, and via Rotger's
(unmaintained?) package
'CollessLike'.
References
A. Mir, F. Rossello, L. A. Rotger, A new balance index for phylogenetic trees.
Math. Biosci. 241, 125-136 (2013).
ms609/tci documentation built on June 28, 2021, 10:51 a.m.
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TotalCopheneticIndex
R package implementing the Total Cophenetic Index measure of Mir et al. (2013).
This package is now simply a wrapper for the function TotalCopheneticIndex()
in the package 'TreeTools'.
The total cophenetic index describes how balanced a phylogenetic tree is, by measuring the how deep the most recent common ancestor of each pair of leaves lies within the tree.
See also
This functionality is now available via the function TotalCopheneticIndex() in the
'TreeTools' package, and via Rotger's
(unmaintained?) package
'CollessLike'.
References
A. Mir, F. Rossello, L. A. Rotger, A new balance index for phylogenetic trees. Math. Biosci. 241, 125-136 (2013).
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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