Man pages for mverouden/isatabr
R implementation for the ISA Abstract Model of the metadata framework

getAssayFileNamesRetrieve the Assay File Name(s) from an ISA object.
getAssayFileNamesPerSampleRetrieve the Assay File Names per Sample Name from an ISA...
getAssayFilesPerStudyRetrieve the Assay File(s) per Study from an ISA object.
getAssayInfoRetrieve the Assay File Name(s) per Study from an ISA object.
getAssayMeasurementTypesRetrieve the Study Assay Measurement Types from an ISA...
getAssayMeasurementTypesPerStudyRetrieve the Study Assay Measurement Types per Study from an...
getAssayNamesRetrieve the unique Assay Name(s) from the Assay Files in an...
getAssayNameToSampleRetrieve Assay Names and Sample Names per Assay File Name...
getAssayTechnologyTypesRetrieve the Study Assay Technology Types from an ISA object.
getAssayTechnologyTypesPerStudyRetrieve the Study Assay Technology Types per Study from an...
getDataFileNamesPerAssayRetrieve the unique Data File Names per Assay from an ISA...
getFactorsRetrieve Factor Values per Study File from an ISA object.
getInvestigationInfoRetrieve the Investigation Indentifier and Investigation File...
getRawDataFileToSampleRetrieve Raw Data File Names and Sample Names per Assay File...
getSamplesRetrieve all Sample Names from an ISA object.
getSamplesPerAssayFileNameRetrieve the unique Sample Names per Assay File Name from an...
getSamplesPerStudyRetrieve the unique Sample Names per Study from an ISA...
getSampleToAssayNameRetrieve Sample Names and Assay Names per Assay File from an...
getSampleToRawDataFileRetrieve Sample Names and Raw Data File Names per Assay File...
getStudyInfoRetrieve the Study Indentifier(s) and Study File Name(s) from...
getTreatmentGroupsRetrieve Sample Names for each treatment per Study File from...
getTreatmentsRetrieve unique treatments per Study File from an ISA object.
ISA-classS4 Class ISA, initialization, extract- and replace-methods
isatabr-packageisatabr package overview.
readISATabRead an ISA-Tab dataset into an R object.
validISAObjectCheck the validity of an object of class ISA.
mverouden/isatabr documentation built on April 21, 2019, 4:35 a.m.