R/data.R

In nathansam/CircadianTools: Collection of Tools for Detecting Rhythmic Genes

#' Gene expression count data of \emph{T. saltator}.
#'
#' A transcriptomics dataset containing the gene expression counts for 100
#' genes of \emph{T. saltator} across 21 hours. First reading is at hour 6.
#' Each time point has 4 replicates with the exception of hour 18 which has 3.
#'
#'
#' @format A data frame with 100 rows and 32 variables:
#' \describe{
#'   \item{sample}{Sample ID}
#'   \item{CT6.2}{Gene expression count at t = 6, replicate 1}
#'   \item{CT6.3}{Gene expression count at t = 6, replicate 2}
#'   \item{CT6.4}{Gene expression count at t = 6, replicate 3}
#'   \item{CT6.5}{Gene expression count at t = 6, replicate 4}
#'   \item{CT9.1}{Gene expression count at t = 9, replicate 1}
#'   \item{CT9.3}{Gene expression count at t = 9, replicate 2}
#'   \item{CT9.4}{Gene expression count at t = 9, replicate 3}
#'   \item{CT9.6}{Gene expression count at t = 9, replicate 4}
#'   \item{CT12.1}{Gene expression count at t = 12, replicate 1}
#'   \item{CT12.2}{Gene expression count at t = 12, replicate 2}
#'   \item{CT12.4}{Gene expression count at t = 12, replicate 3}
#'   \item{CT12.5}{Gene expression count at t = 12, replicate 4}
#'   \item{CT15.1}{Gene expression count at t = 15, replicate 1}
#'   \item{CT15.3}{Gene expression count at t = 15, replicate 2}
#'   \item{CT15.4}{Gene expression count at t = 15, replicate 3}
#'   \item{CT15.5}{Gene expression count at t = 15, replicate 4}
#'   \item{CT18.1}{Gene expression count at t = 18, replicate 1}
#'   \item{CT18.2}{Gene expression count at t = 18, replicate 2}
#'   \item{CT18.5}{Gene expression count at t = 18, replicate 3}
#'   \item{CT21.2}{Gene expression count at t = 21, replicate 1}
#'   \item{CT21.4}{Gene expression count at t = 21, replicate 2}
#'   \item{CT21.5}{Gene expression count at t = 21, replicate 3}
#'   \item{CT21.6}{Gene expression count at t = 21, replicate 4}
#'   \item{CT24.2}{Gene expression count at t = 24, replicate 1}
#'   \item{CT24.3}{Gene expression count at t = 24, replicate 2}
#'   \item{CT24.4}{Gene expression count at t = 24, replicate 3}
#'   \item{CT24.6}{Gene expression count at t = 24, replicate 4}
#'   \item{CT27.1}{Gene expression count at t = 27, replicate 1}
#'   \item{CT27.2}{Gene expression count at t = 27, replicate 2}
#'   \item{CT27.3}{Gene expression count at t = 27, replicate 3}
#'   \item{CT27.5}{Gene expression count at t = 27, replicate 4}
#' }
#' @source \url{http://doi.org/10.7717/peerj.2555}
"Laurasmappings"