README.md
In ncborcherding/exigence: Fix gene symbols that are messed up by Excel
exigence
Fix genes from excel
Did I write a function/package just to address the issue with Excel autoconverting genes to date? Yes.
An estimated 20% of published articles contain these autoconversion errors according Ziemann et al,
and despite the recent HUGO change in these gene symbols in August 2020, I still have to deal with this issue from collaborators. Thought
I would share if anyone is interested.
How to use:
file <- read.csv("data.frame)
file <- exTerminate(file, gene.Column = NULL, mouse = FALSE) #for genes in row names and human data
file <- exTerminate(file, gene.Colum = "genes", mouse = TRUE) #for genes in "genes" vector and mouse data
ncborcherding/exigence documentation built on June 3, 2024, 7:03 p.m.
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exigence
Fix genes from excel
Did I write a function/package just to address the issue with Excel autoconverting genes to date? Yes. An estimated 20% of published articles contain these autoconversion errors according Ziemann et al, and despite the recent HUGO change in these gene symbols in August 2020, I still have to deal with this issue from collaborators. Thought I would share if anyone is interested.
How to use:
file <- read.csv("data.frame)
file <- exTerminate(file, gene.Column = NULL, mouse = FALSE) #for genes in row names and human data
file <- exTerminate(file, gene.Colum = "genes", mouse = TRUE) #for genes in "genes" vector and mouse data
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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