In nickbond/BASEmetab: Estimate Single-station Whole-stream Metabolic Rates from Diel Dissolved Oxygen (DO) Curves

BASEmetab

Code accompanying Grace et al. (2015) Fast processing of diel oxygen curves: estimating stream metabolism with BASE (BAyesian Single-station Estimation). Limnology and Oceanography: Methods, 13, 103–114 http://onlinelibrary.wiley.com/doi/10.1002/lom3.10011/full

Currently the BASEmetab package contains just a single user function bayesmetab, which performs the above analysis.

Run ?bayesmetab for details.

Installation

To install run the following code:

  # install devtools package
  install.packages(c("devtools"))

  # install BASEmetab package
    devtools::install_github("dgiling/BASEmetab")

    # Remove the package zip after installation
    unlink("BASEmetab.zip")

    #load library
    library(BASEmetab)

Example

See the help file associated with bayesmetab.

Developer

Technical code prepared by Darren Giling [e-mail] Packaged by Nick Bond [e-mail]

knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  fig.path = "README-"
)

nickbond/BASEmetab documentation built on May 28, 2019, 9:31 a.m.