API for nosarcasm/MEGENA
Multiscale Clustering of Geometrical Network

Global functions
MEGENA Man page
MEGENA-package Man page
MEGENA.ModuleSummary Man page Source code
Sample_Expression.RData Man page
anyNA Source code
calculate.PFN Man page Source code
calculate.correlation Man page Source code
calculate.rho Source code
calculate.rho.twoMat Source code
cluster.scales Source code
coerce.manyTables Source code
collect.table.features Source code
combine.table Source code
compact.indiv Source code
compute.PFN.par Man page Source code
count.FD Source code
datExpr Man page
do.MEGENA Man page Source code
evaluate.boundary Source code
evaluate.flow Source code
evaluate.significance Source code
extract.module_with_hub Source code
flatten.table Source code
geneSet.to.Membership Source code
get.DB.index Source code
get.DegreeHubStatistic Man page Source code
get.DegreeProfiles Source code
get.LPI Source code
get.connectedModule Source code
get.geneSet.nodeInfo Source code
get.hub.summary Man page Source code
get.intraModule.distance Source code
get.median Source code
get.moduleMedian Source code
get.multiScale.hubs Source code
get.network.metric Source code
get.nodeTopoInfo Source code
get.random.D Source code
get.randomPlanar Source code
get.scalwiseHubs Source code
get.subnetworks Source code
get.union.cut Man page Source code
iplanarityTesting Source code
iterative.boundaryUpdate Source code
match.connected Source code
membership.to.geneSet Source code
module.flowMatrix Source code
module_rank Source code
nested.kmeans Source code
nested.kmeans.all Source code
node.summary Source code
output.geneSet.file Man page Source code
pam.cleanSplit Source code
pam.split Source code
planaritytest Man page Source code
plot_module Man page Source code
plot_module_hierarchy Man page Source code
plot_subgraph Man page Source code
random.T1 Source code
random.T2 Source code
read.geneSet Man page Source code
serial.PFN Source code
test.pairwiseCor Source code
test.pairwiseCor.par Source code
nosarcasm/MEGENA documentation built on Aug. 31, 2018, 4:24 a.m.