Files in nwfsc-assess/nwfscSurvey
Northwest Fisheries Science Center Survey
.Rbuildignore
.Rhistory
.gitattributes
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/call-update-docs.yml
.github/workflows/call-update-pkgdown.yml
.gitignore
DESCRIPTION
NAMESPACE
NEWS.md
R/Biomass.fn.R
R/Format.AKSlope.fn.R
R/GetN.fn.R
R/GetSpp.fn.R
R/GetSppDefault.fn.R
R/GetStrata.fn.R
R/GetSurveyAbb.fn.R
R/PlotMap.fn.R
R/PlotPresenceAbsence.fn.R
R/PlotSexRatioStrata.fn.R
R/PullBio.fn.R
R/PullCatch.fn.R
R/PullHaul.fn.R
R/PullSpp.fn.R
R/ReadInAges.fn.R
R/ReadInLengths.R
R/SexRatio.fn.R
R/StrataAreas.fn.R
R/StrataFactors.fn.R
R/SurveyAFs.fn.R
R/SurveyAgeAtLen.fn.R
R/SurveyLFs.fn.R
R/UnexpandedAF.fn.R
R/checkStrata.fn.R
R/check_dir.R
R/check_survey.R
R/codify_sex.R
R/createMatrix.fn.R
R/createStrataDF.fn.R
R/data.R
R/draw.r
R/est_growth.R
R/est_weight_length.R
R/fit_vbgrowth.R
R/get_json.R
R/get_url.R
R/label.r
R/plotBio.fn.R
R/plotBioStrata.fn.R
R/plotFreqData.fn.R
R/plotSexRatio.fn.R
R/plotVarLengthAtAge.fn.R
R/plot_age_length_sampling.R
R/plot_bio_patterns.R
R/plot_comps.R
R/plot_cpue.R
R/plot_proportion.R
R/plot_varlenage.R
R/plot_westcoast.R
R/pretty_label_column.r
R/pull_bio.R
R/pull_biological_samples.R
R/pull_catch.R
R/pull_gemm.R
R/pull_haul.R
R/save_rdata.r
R/stopifnot.R
R/unexpandedLF.fn.R
README.md
_pkgdown.yml
data-raw/FRAM_DW_Fish_list.R
data-raw/FRAM_DW_Fish_list.csv
data-raw/FRAM_DW_grid.R
data-raw/Selection Set 2018 with Cell Corners.xlsx
data/AFSCforeign_hauls.rda
data/PullSpp.rda
data/SA3.rda
data/SA3_v2021.1.rda
data/availablecells.rda
data/bio_nwfsc_combo.rda
data/catch_nwfsc_combo.rda
man-roxygen/common_name.R
man-roxygen/convert.R
man-roxygen/dir.R
man-roxygen/sci_name.R
man-roxygen/survey.R
man-roxygen/verbose.R
man-roxygen/years.R
man/AFSCforeign_hauls.Rd
man/Biomass.fn.Rd
man/CheckStrata.fn.Rd
man/CreateStrataDF.fn.Rd
man/Format.AKSlope.fn.Rd
man/GetN.fn.Rd
man/GetSpp.fn.Rd
man/GetSppDefault.fn.Rd
man/GetStrata.fn.Rd
man/GetSurveyAbb.fn.Rd
man/PlotBio.fn.Rd
man/PlotBioStrata.fn.Rd
man/PlotFreqData.fn.Rd
man/PlotMap.fn.Rd
man/PlotPresenceAbsence.fn.Rd
man/PlotSexRatio.fn.Rd
man/PlotSexRatioStrata.fn.Rd
man/PlotVarLengthAtAge.fn.Rd
man/PullBio.fn.Rd
man/PullCatch.fn.Rd
man/PullHaul.fn.Rd
man/PullSpp.Rd
man/PullSpp.fn.Rd
man/ReadInAges.fn.Rd
man/ReadInLengths.fn.Rd
man/SA3.Rd
man/SA3_v2021.1.Rd
man/SexRatio.fn.Rd
man/StrataAreas.fn.Rd
man/StrataFactors.fn.Rd
man/SurveyAFs.fn.Rd
man/SurveyAgeAtLen.fn.Rd
man/SurveyLFs.fn.Rd
man/UnexpandedAFs.fn.Rd
man/UnexpandedLFs.fn.Rd
man/availablecells.Rd
man/bio_nwfsc_combo.Rd
man/catch_nwfsc_combo.Rd
man/check_dir.Rd
man/check_survey.Rd
man/codify_sex.Rd
man/createMatrix.Rd
man/draw_USEEZ.Rd
man/draw_theme.Rd
man/est_growth.Rd
man/estimate_weight_length.Rd
man/fit_vbgrowth.Rd
man/get_json.Rd
man/get_url.Rd
man/plot_age_length_sampling.Rd
man/plot_bio_patterns.Rd
man/plot_comps.Rd
man/plot_cpue.Rd
man/plot_proportion.Rd
man/plot_varlenage.Rd
man/plot_westcoast.Rd
man/pull_bio.Rd
man/pull_biological_samples.Rd
man/pull_catch.Rd
man/pull_gemm.Rd
man/pull_haul.Rd
man/save_rdata.Rd
man/stopifnotcolumn.Rd
man/wh_plot_proportion.Rd
nwfscSurvey.Rproj
tests/.DS_Store
tests/testthat.R
tests/testthat/test-codify_sex.R
tests/testthat/test-data.R
tests/testthat/test-spp.R
tests/testthat/test-strata.R
tests/testthat/test-wh_proportion.R
vignettes/.gitignore
vignettes/nwfscSurvey.Rmd
