API for paul-shannon/IGV
igvR: integrative genomics viewer

Global functions
.BedpeInteractionsTrack Man page
.DataFrameAnnotationTrack Man page
.DataFrameQuantitativeTrack Man page
.GFF3Track Man page
.GRangesAnnotationTrack Man page
.GRangesQuantitativeTrack Man page
.GWASTrack Man page
.GWASUrlTrack Man page
.GenomicAlignmentTrack Man page
.QuantitativeTrack Man page
.RemoteAlignmentTrack Man page
.Track Man page
.UCSCBedAnnotationTrack Man page
.UCSCBedGraphQuantitativeTrack Man page
.displayAlignmentTrack Source code
.displayAnnotationTrack Source code
.displayBedpeInteractionsTrack Source code
.displayGFF3Track Source code
.displayGWASTrack Source code
.displayGWASUrlTrack Source code
.displayQuantitativeTrack Source code
.displayRemoteAlignmentTrack Source code
.displayVariantTrack Source code
.igvAnnotationTrack Man page
.igvR Man page
.onLoad Source code
.parseChromLocString Source code
.writeMotifLogoImagesUpdateTrackNames Source code
BedpeInteractionsTrack Man page Source code
BedpeInteractionsTrack-class Man page
DataFrameAnnotationTrack Man page Source code
DataFrameAnnotationTrack-class Man page
DataFrameQuantitativeTrack Man page Source code
DataFrameQuantitativeTrack-class Man page
GFF3Track Man page Source code
GFF3Track-class Man page
GRangesAnnotationTrack Man page Source code
GRangesAnnotationTrack-class Man page
GRangesQuantitativeTrack Man page Source code
GRangesQuantitativeTrack-class Man page
GWASTrack Man page Source code
GWASTrack-class Man page
GWASUrlTrack Man page Source code
GenomicAlignmentTrack Man page Source code
GenomicAlignmentTrack-class Man page
QuantitativeTrack Man page Source code
QuantitativeTrack-class Man page
RemoteAlignmentTrack Man page Source code
RemoteAlignmentTrack-class Man page
Track Man page Source code
Track-class Man page
UCSCBedAnnotationTrack Man page Source code
UCSCBedAnnotationTrack-class Man page
UCSCBedGraphQuantitativeTrack Man page Source code
UCSCBedGraphQuantitativeTrack-class Man page
VariantTrack Man page Source code
VariantTrack-class Man page
currently.supported.stock.genomes Man page Source code
displayTrack Man page
displayTrack,igvR-method Man page
enableMotifLogoPopups Man page
enableMotifLogoPopups,igvR-method Man page
getGenomicRegion Man page
getGenomicRegion,igvR-method Man page
getSupportedGenomes Man page
getSupportedGenomes,igvR-method Man page
getTrackNames Man page
getTrackNames,igvR-method Man page
igvAnnotationTrack Man page Source code
igvAnnotationTrack-class Man page
igvR Man page Source code
igvR-class Man page
myQP Source code
parseAndValidateGenomeSpec Man page Source code
ping Man page
ping,igvR-method Man page
removeTracksByName Man page
removeTracksByName,igvR-method Man page
saveToSVG Man page
saveToSVG,igvR-method Man page
setCustomGenome Man page
setCustomGenome,igvR-method Man page
setGenome Man page
setGenome,igvR-method Man page
setTrackClickFunction Man page
setTrackClickFunction,igvR-method Man page
setTrackHeight Man page
setTrackHeight,igvR-method Man page
setupMessageHandlers Source code
showGenomicRegion Man page
showGenomicRegion,igvR-method Man page
showTrackLabels Man page
showTrackLabels,igvR-method Man page
trackInfo Man page
trackInfo,Track-method Man page
trackSize Man page
trackSize,BedpeInteractionsTrack-method Man page
trackSize,DataFrameAnnotationTrack-method Man page
trackSize,DataFrameQuantitativeTrack-method Man page
trackSize,GFF3Track-method Man page
trackSize,GRangesAnnotationTrack-method Man page
trackSize,GRangesQuantitativeTrack-method Man page
trackSize,GWASTrack-method Man page
trackSize,GWASUrlTrack-method Man page
trackSize,GenomicAlignmentTrack-method Man page
trackSize,QuantitativeTrack-method Man page
trackSize,UCSCBedAnnotationTrack-method Man page
trackSize,UCSCBedGraphQuantitativeTrack-method Man page
trackSize,VariantTrack-method Man page
url.exists Man page Source code Source code
zoomIn Man page
zoomIn,igvR-method Man page
zoomOut Man page
zoomOut,igvR-method Man page
paul-shannon/IGV documentation built on Nov. 5, 2023, 2:09 p.m.