API for pinin4fjords/shinyngs
Shiny apps for NGS data

Global functions
ExploratorySummarizedExperiment Man page Source code
ExploratorySummarizedExperiment-class Man page
ExploratorySummarizedExperimentList Man page Source code
ExploratorySummarizedExperimentList-class Man page
annotatedHeatmap Man page Source code
assaydatatable Man page Source code
assaydatatableInput Man page Source code
assaydatatableOutput Man page Source code
barcode_plot Man page Source code
barplot Man page Source code
barplotInput Man page Source code
barplotOutput Man page Source code
bootstrapMedian Man page Source code
boxplot Man page Source code
boxplotInput Man page Source code
boxplotOutput Man page Source code
calculateDendrogram Man page Source code
calculateDist Man page Source code
calculatePCAFractionExplained Man page Source code
cardinalNumericField Man page Source code
chipseq Man page Source code
chipseqInput Man page Source code
chooseGroupingVariables Man page Source code
clustering Man page Source code
clusteringDendrogram Man page Source code
clusteringInput Man page Source code
clusteringOutput Man page Source code
colGeomMeans Man page Source code
colMedians Man page Source code
colormaker Man page Source code
colormakerInput Man page Source code
contrasts Man page Source code
contrastsInput Man page Source code
contrastsOutput Man page Source code
convertIds Man page Source code
dendro Man page Source code
dendroInput Man page Source code
dendroOutput Man page Source code
dexseqplot Man page Source code
dexseqplotInput Man page Source code
dexseqplotOutput Man page Source code
dexseqtable Man page Source code
dexseqtableInput Man page Source code
dexseqtableInputFields Man page Source code
dexseqtableOutput Man page Source code
differentialtable Man page Source code
differentialtableInput Man page Source code
differentialtableOutput Man page Source code
eselistFromYAML Man page Source code
evaluateCardinalFilter Man page Source code
experimenttable Man page Source code
experimenttableInput Man page Source code
experimenttableOutput Man page Source code
fieldSets Man page Source code
foldChange Man page Source code
foldchangeplot Man page Source code
foldchangeplotInput Man page Source code
foldchangeplotOutput Man page Source code
gene Man page Source code
geneBarplot Man page Source code
geneInput Man page Source code
geneModelPlot Man page Source code
geneOutput Man page Source code
geneselect Man page Source code
geneselectInput Man page Source code
genesetanalysistable Man page Source code
genesetanalysistableInput Man page Source code
genesetanalysistableOutput Man page Source code
genesetbarcodeplot Man page Source code
genesetbarcodeplotInput Man page Source code
genesetbarcodeplotOutput Man page Source code
genesetselect Man page Source code
genesetselectInput Man page Source code
geom_mean Man page Source code
ggplot_boxplot Man page Source code
ggplotify Man page Source code
groupby Man page Source code
groupbyInput Man page Source code
heatmap Man page Source code
heatmapInput Man page Source code
heatmapOutput Man page Source code
hiddenInput Man page Source code
idToLabel Man page Source code
illuminaarray Man page Source code
illuminaarrayInput Man page Source code
illuminaarrayqc Man page Source code
illuminaarrayqcInput Man page Source code
illuminaarrayqcOutput Man page Source code
inlineField Man page Source code
interactiveHeatmap Man page Source code
interleaveColumns Man page Source code
labelMatrix Man page Source code
labelselectfield Man page Source code
labelselectfieldInput Man page Source code
linkMatrix Man page Source code
makeAnnotationColors Man page Source code
makeColorScale Man page Source code
makeContrastControl Man page Source code
makeContrastFilterSet Man page Source code
makePackageCitation Man page Source code
maplot Man page Source code
maplotInput Man page Source code
maplotOutput Man page Source code
modalInput Man page Source code
modalOutput Man page Source code
na.replace Man page Source code
nlines Man page Source code
pca Man page Source code
pcaInput Man page Source code
pcaOutput Man page Source code
plotdownload Man page Source code
plotdownloadInput Man page Source code
plotly_boxplot Man page Source code
plotly_quartiles Man page Source code
prepareApp Man page Source code
prettifyGeneSetName Man page Source code
prettifyVariablename Man page Source code
pushToList Man page Source code
readreports Man page Source code
readreportsInput Man page Source code
readreportsOutput Man page Source code
rnaseq Man page Source code
rnaseqInput Man page Source code
rowmetatable Man page Source code
rowmetatableInput Man page Source code
rowmetatableOutput Man page Source code
runPCA Man page Source code
sampleselect Man page Source code
sampleselectInput Man page Source code
scatterplot Man page Source code
scatterplotInput Man page Source code
scatterplotOutput Man page Source code
scatterplotcontrols Man page Source code
scatterplotcontrolsInput Man page Source code
selectmatrix Man page Source code
selectmatrixInput Man page Source code
shinyngs Man page
shinyngs-package Man page
simpleApp Man page Source code
simpletable Man page Source code
simpletableInput Man page Source code
simpletableOutput Man page Source code
simplifyContrastTable Man page Source code
singleValidMatrix Man page Source code
splitStringToFixedwidthLines Man page Source code
summarisematrix Man page Source code
summarisematrixInput Man page Source code
summarizeMatrix Man page Source code
summarySE Man page Source code
ucfirst Man page Source code
unpack.list Man page Source code
upset Man page Source code
upsetInput Man page Source code
upsetOutput Man page Source code
volcanoplot Man page Source code
volcanoplotInput Man page Source code
volcanoplotOutput Man page Source code
pinin4fjords/shinyngs documentation built on Aug. 27, 2017, 9:07 p.m.