API for pmartR/pmartRqc
Panomics Marketplace - Quality Control and Statistical Analysis for Panomics Data

Global functions
MSnSet2pepData Man page Source code
all_subset Man page Source code
analysis_log Man page Source code
anova_cpp Source code
anova_filter Man page Source code
anova_test Man page Source code
anova_test_R Source code
applyFilt Man page Man page Man page Man page Man page Man page Man page Source code
applyFilt.customFilt Man page Source code
applyFilt.cvFilt Man page Source code
applyFilt.imdanovaFilt Man page Source code
applyFilt.moleculeFilt Man page Source code
applyFilt.proteomicsFilt Man page Source code
applyFilt.rmdFilt Man page Source code
as.isobaricpepData Man page Source code Source code
as.lipidData Man page Source code Source code
as.metabData Man page Source code Source code
as.pepData Man page Source code Source code
as.proData Man page Source code Source code
bpquant_loop Man page Source code
bpquant_mod Man page Source code
build_pair_mat Source code
build_x_mat Source code
combine_fn_mean Source code
combine_fn_median Source code
cor_result Man page Source code
count_missing Source code
count_missing_cpp Source code
create_c_matrix Source code
custom_filter Man page Source code
cv.calc Man page Source code
cv_filter Man page Source code
dim_reduction Man page Source code
edata_replace Man page Man page Man page Man page Man page Source code
edata_replace.lipidData Man page Source code
edata_replace.metabData Man page Source code
edata_replace.pepData Man page Source code
edata_replace.proData Man page Source code
edata_summary Man page Source code
edata_transform Man page Man page Man page Man page Man page Source code
edata_transform.lipidData Man page Source code
edata_transform.metabData Man page Source code
edata_transform.pepData Man page Source code
edata_transform.proData Man page Source code
fit_surv Man page Source code
fold_change_diff Source code
fold_change_diff_copy Source code
fold_change_diff_na_okay Source code
fold_change_logbase2 Source code
fold_change_ratio Source code
g_test Man page Source code
get_comparisons Man page Man page Source code Source code
get_data_norm Man page Source code
get_data_scale Man page Source code
get_edata_cname Man page Source code
get_emeta_cname Man page Source code
get_fdata_cname Man page Source code
get_filters Man page Source code
get_group_info Man page Source code
get_group_table Man page Source code
get_isobaric_norm Man page Source code
getchecknames Man page Source code
group_comparison_anova Man page Source code
group_comparison_anova_cpp Source code
group_comparison_imd Source code
group_designation Man page Source code
gtest_cpp Source code
gtest_filter Man page Source code
hello Man page
holm_cpp Source code
imd_anova Man page Source code
imd_test Man page Source code
imd_test_R Source code
imdanova_filter Man page Source code
isoformRes_func Source code
kw_rcpp Source code
los Man page Source code
mad_transform Man page Source code
mean_center Man page Source code
mean_sse_fun Source code
median_center Man page Source code
missingval_heatmap Man page Source code Source code
missingval_result Man page Source code
missingval_scatterplot Man page Source code Source code
missingval_volcanoplot Man page Source code Source code
molecule_filter Man page Source code
myfunc Source code
nonmissing_per_group Man page Source code
nonmissing_per_grp Source code
normalize_global Man page Source code
normalize_isobaric Man page Source code
normalize_loess Man page Source code
normalize_quantile Man page Source code
p_adjustment_anova Man page Source code
plot-pmartR Man page
plot.corRes Man page Source code Source code
plot.customFilt Man page Source code Source code
plot.cvFilt Man page Source code Source code
plot.dataRes Man page Source code
plot.dimRes Man page Source code Source code
plot.imdanovaFilt Man page Source code Source code
plot.isobaricnormRes Man page Source code Source code
plot.lipidData Man page Source code Source code
plot.metabData Man page Source code Source code
plot.moleculeFilt Man page Source code Source code
plot.naRes Man page Source code Source code
plot.normRes Man page Source code Source code
plot.pepData Man page Source code Source code
plot.proData Man page Source code Source code
plot.proteomicsFilt Man page Source code Source code
plot.rmdFilt Man page Source code Source code
plot.statRes Man page Source code
plot_km Man page Source code
pmartR Man page
pmartR-package Man page
pmartR_filter_worker Man page Source code
pooled_cv_rcpp Source code
ppp Man page Source code
ppp_rip Man page Source code
pquant_mean Man page Source code
pquant_median Man page Source code
pre_imdanova_melt Man page Source code
print.customFilt Man page Source code
print.cvFilt Man page Source code
print.dataRes Man page Source code
print.imdanovaFilt Man page Source code
print.lipidData Man page Source code
print.metabData Man page Source code
print.moleculeFilt Man page Source code
print.normRes Man page Source code
print.pepData Man page Source code
print.proData Man page Source code
print.proteomicsFilt Man page Source code
print.rmdFilt Man page Source code
print.statRes Source code
proj_mat Source code
proj_mat_cpp Source code
project_to_null Source code
project_to_null_cpp Source code
protein_quant Man page Source code
proteomics_filter Man page Source code
ptukey_speed Source code
qrollup Man page Source code
ranked_holm_cpp Source code
rcpp_hello_world Source code
reduce_xmatrix Source code
report_dataRes Man page Source code
rip Man page Source code
rmd_conversion Man page Source code
rmd_filter Man page Man page Man page Man page Man page Source code
rmd_filter.lipidData Man page Source code
rmd_filter.metabData Man page Source code
rmd_filter.pepData Man page Source code
rmd_filter.proData Man page Source code
rrollup Man page Source code
run_group_meancor Man page Source code
run_kurtosis Man page Source code
run_mad Man page Source code
run_prop_missing Man page Source code
run_skewness Man page Source code
run_twofactor_cpp Source code
setchecknames Man page Source code
statRes-class Man page
statRes_output Man page Source code
summary-pmartR Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page
summary.corRes Man page Source code
summary.customFilt Man page Source code
summary.cvFilt Man page Source code
summary.dimRes Man page Source code
summary.imdanovaFilt Man page Source code
summary.isobaricnormRes Man page Source code
summary.lipidData Man page Source code
summary.metabData Man page Source code
summary.moleculeFilt Man page Source code
summary.normRes Man page Source code
summary.pepData Man page Source code
summary.proData Man page Source code
summary.proteomicsFilt Man page Source code
summary.rmdFilt Man page Source code
summary.statRes Source code
summary_km Man page Source code
surv_designation Man page Source code
test_normalization Man page Source code
two_factor_anova_cpp Source code
vector_replace Man page Source code
write_stat_results Man page Source code
write_stat_results_omics Source code
zrollup Man page Source code
zscore_transform Man page Source code
pmartR/pmartRqc documentation built on Aug. 10, 2018, 7:36 p.m.