README.md

In poissonconsulting/mwst2: Mountain Whitefish Spawn Timing

Mountain Whitefish Spawn Timing R Analysis Package

mwst2 is the companion R analysis package for Irvine et al.'s manuscript When Do Mountain Whitefish (Prosopium williamsoni) Spawn? A Comparison of Estimates Based on Gonadosomatic Indices and Spawner and Egg Counts.

Installation

To use the mwst2 package first install R (version 3.2.2 or greater) and JAGS (version 3.4.0 or greater).

Then execute the following code at the R terminal:

install.packages("devtools") # if not already installed
devtools::install_github("poissonconsulting/mwst2")
library(mwst2)

Usage

To quickly replicate the results with unreliable model estimates use:

replicate_results()

This option is useful for testing everything is installed correctly.

To replicate the results with reliable model estimates use:

replicate_results("report")

Information

For more information type ?replicate_results after loading the package.

Code of Conduct

Please note that the mwst2 project is released with a Contributor Code of Conduct. By contributing to this project, you agree to abide by its terms.

poissonconsulting/mwst2 documentation built on Sept. 9, 2020, 11:22 a.m.